RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LOXHD1Q8IVV2 1947 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 CCDC169A6NNP5 214 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 INO80B-WBP1J3KQ70 363 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 EFCAB14O75071 495 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 FAM13AO94988 1023 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 AMPD3Q01432 767 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 CATSPER4Q7RTX7 472 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 ZBTB8OSQ8IWT0 167 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 SPIRE2Q8WWL2 714 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 LINC01599Q8WXQ3 324 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 FTHL17Q9BXU8 183 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 C2orf40Q9H1Z8 148 aa27.04■■□□□ 1.92
VEGFA-209ENST00000425836 LARSQ9P2J5 1176 aaKnown RBP27.04■■□□□ 1.92
VEGFA-209ENST00000425836 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-209ENST00000425836 ENPP3O14638 875 aa27.03■■□□□ 1.92
VEGFA-209ENST00000425836 MGEA5O60502 916 aa27.03■■□□□ 1.92
VEGFA-209ENST00000425836 TBCAO75347 108 aaKnown RBP27.03■■□□□ 1.92
VEGFA-209ENST00000425836 WDR5P61964 334 aaKnown RBP27.03■■□□□ 1.92
VEGFA-209ENST00000425836 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.03■■□□□ 1.922e-35■■■■□ 25.1
VEGFA-209ENST00000425836 FAM43BQ6ZT52 329 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-209ENST00000425836 TRIM9Q9C026 710 aa27.03■■□□□ 1.92
VEGFA-209ENST00000425836 ZHX3Q9H4I2 956 aa27.03■■□□□ 1.92
VEGFA-209ENST00000425836 PARVGQ9HBI0 331 aa27.03■■□□□ 1.92
VEGFA-209ENST00000425836 A0A1W2PPC1 479 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 ZNF202O95125 648 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 DSC3Q14574 896 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 MYCT1Q8N699 235 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 PAGE5Q96GU1 130 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 C7orf25Q9BPX7 421 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 KMT5AQ9NQR1 393 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 KCNG1Q9UIX4 513 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 SLC4A7Q9Y6M7 1214 aa27.02■■□□□ 1.92
VEGFA-209ENST00000425836 AFMP43652 599 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 PCBP1Q15365 356 aaKnown RBP eCLIP27.01■■□□□ 1.924e-7■■□□□ 11.7
VEGFA-209ENST00000425836 AMHR2Q16671 573 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 GRAMD1CQ8IYS0 662 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 FMR1NBQ8N0W7 255 aaPredicted RBP27.01■■□□□ 1.92
VEGFA-209ENST00000425836 ENGASEQ8NFI3 743 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 ADAM2Q99965 735 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 TSPYL2Q9H2G4 693 aaPredicted RBP27.01■■□□□ 1.92
VEGFA-209ENST00000425836 FZD8Q9H461 694 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 ARHGAP28Q9P2N2 729 aa27.01■■□□□ 1.92
VEGFA-209ENST00000425836 SLC16A4O15374 487 aa27.01■■□□□ 1.91
VEGFA-209ENST00000425836 PRPF40AO75400 957 aaKnown RBP27.01■■□□□ 1.91
VEGFA-209ENST00000425836 KCNJ6P48051 423 aa27.01■■□□□ 1.91
VEGFA-209ENST00000425836 SNW1Q13573 536 aaKnown RBP27.01■■□□□ 1.91
VEGFA-209ENST00000425836 CNNM4Q6P4Q7 775 aa27.01■■□□□ 1.91
VEGFA-209ENST00000425836 CCDC113Q9H0I3 377 aa27.01■■□□□ 1.91
VEGFA-209ENST00000425836 AGPAT5Q9NUQ2 364 aa27.01■■□□□ 1.91
VEGFA-209ENST00000425836 RANBP2P49792 3224 aaKnown RBP27.01■■□□□ 1.91
VEGFA-209ENST00000425836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27■■□□□ 1.91
VEGFA-209ENST00000425836 TSPAN1O60635 241 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 IDEP14735 1019 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 HOXA11P31270 313 aaPredicted RBP27■■□□□ 1.91
VEGFA-209ENST00000425836 EFNA5P52803 228 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 SMTNP53814 917 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 DEFB103AP81534 67 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 KRBA2Q6ZNG9 492 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 CHST12Q9NRB3 414 aa27■■□□□ 1.91
VEGFA-209ENST00000425836 PRMT7Q9NVM4 692 aaPredicted RBP27■■□□□ 1.91
VEGFA-209ENST00000425836 PIN4Q9Y237 131 aaKnown RBP27■■□□□ 1.91
VEGFA-209ENST00000425836 FRMD3A2A2Y4 597 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 DENND3A2RUS2 1198 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 ERLIN2O94905 339 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 CASP1P29466 404 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 FAM160A1Q05DH4 1040 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 MAPK6Q16659 721 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 FAM187BQ17R55 369 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 PPP4R3CPQ6ZMV5 832 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 TMEM161BQ8NDZ6 487 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 CNNM3Q8NE01 707 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 FIZ1Q96SL8 496 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 BLZF1Q9H2G9 400 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 TMEM134Q9H6X4 195 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 RGS18Q9NS28 235 aa26.99■■□□□ 1.91
VEGFA-209ENST00000425836 K7ERI5 159 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 TRAK2O60296 914 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 ZSCAN20P17040 1043 aaPredicted RBP26.98■■□□□ 1.91
VEGFA-209ENST00000425836 LIG1P18858 919 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 NCKAP1LP55160 1127 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 UBE2HP62256 183 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 ASIC1P78348 528 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 CUL4BQ13620 913 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 SFR1Q86XK3 245 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 GBP4Q96PP9 640 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 PANK4Q9NVE7 773 aa26.98■■□□□ 1.91
VEGFA-209ENST00000425836 B4GALT5O43286 388 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 AMHP03971 560 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 PRKCBP05771 671 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 GAP43P17677 238 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 TAS1R3Q7RTX0 852 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 PHOSPHO2Q8TCD6 241 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 PRIMPOLQ96LW4 560 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 ACKR2O00590 384 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 EDN1P05305 212 aa26.97■■□□□ 1.91
VEGFA-209ENST00000425836 MAPTP10636 758 aaKnown RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 ATP2A2P16615 1042 aaKnown RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 ARF4P18085 180 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 NCBP1Q09161 790 aaKnown RBP26.97■■□□□ 1.91
VEGFA-209ENST00000425836 HERC4Q5GLZ8 1057 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms