RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SEPT8Q92599 483 aa26.57■■□□□ 1.84
APOE-202ENST00000425718 FTHL17Q9BXU8 183 aa26.57■■□□□ 1.84
APOE-202ENST00000425718 EXOC1Q9NV70 894 aa26.57■■□□□ 1.84
APOE-202ENST00000425718 PRMT7Q9NVM4 692 aaPredicted RBP26.57■■□□□ 1.84
APOE-202ENST00000425718 TET1Q8NFU7 2136 aa26.57■■□□□ 1.84
APOE-202ENST00000425718 CEP290O15078 2479 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 CACNB1Q02641 598 aaPredicted RBP26.56■■□□□ 1.84
APOE-202ENST00000425718 COASYQ13057 564 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 BSNDQ8WZ55 320 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 HVCN1Q96D96 273 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 GSDMAQ96QA5 445 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 PPP1R16BQ96T49 567 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 ST6GALNAC4Q9H4F1 302 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 ARHGAP28Q9P2N2 729 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 ZMYND8Q9ULU4 1186 aaPredicted RBP26.56■■□□□ 1.84
APOE-202ENST00000425718 UMODL1Q5DID0 1318 aa26.56■■□□□ 1.84
APOE-202ENST00000425718 SFI1A8K8P3 1242 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 EFCAB14O75071 495 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 ERLIN2O94905 339 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 GHRP10912 638 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 ACTN1P12814 892 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 AXLP30530 894 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 NCKAP1LP55160 1127 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 DPYDQ12882 1025 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 STRN3Q13033 797 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 LPIN1Q14693 890 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 KCNB1Q14721 858 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 FAM187BQ17R55 369 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 SYAP1Q96A49 352 aaPredicted RBP26.55■■□□□ 1.84
APOE-202ENST00000425718 SCLYQ96I15 445 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 IFIH1Q9BYX4 1025 aaKnown RBP26.55■■□□□ 1.84
APOE-202ENST00000425718 BLZF1Q9H2G9 400 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 MRPL44Q9H9J2 332 aaKnown RBP26.55■■□□□ 1.84
APOE-202ENST00000425718 IL23AQ9NPF7 189 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 PCDHB13Q9Y5F0 798 aa26.55■■□□□ 1.84
APOE-202ENST00000425718 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 INO80B-WBP1J3KQ70 363 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 K7ENM7 598 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 K7ERI5 159 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 RPN1P04843 607 aaKnown RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 MDM2Q00987 491 aaPredicted RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 SKOR2Q2VWA4 1001 aaPredicted RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 PSRC1Q6PGN9 363 aaPredicted RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 PPP4R3CPQ6ZMV5 832 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 CATSPER4Q7RTX7 472 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 SFR1Q86XK3 245 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 GRAMD1CQ8IYS0 662 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 BADQ92934 168 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 SMARCE1Q969G3 411 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 NUP62CLQ9H1M0 184 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 RNF216Q9NWF9 866 aaPredicted RBP26.54■■□□□ 1.84
APOE-202ENST00000425718 MICAL3Q7RTP6 2002 aa26.54■■□□□ 1.84
APOE-202ENST00000425718 KIF20AO95235 890 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 SYN1P17600 705 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 PLEKHG4Q58EX7 1191 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 FAM26FQ5R3K3 315 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 CNKSR3Q6P9H4 555 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 APBB1IPQ7Z5R6 666 aaPredicted RBP26.53■■□□□ 1.84
APOE-202ENST00000425718 MTIF3Q9H2K0 278 aaKnown RBP26.53■■□□□ 1.84
APOE-202ENST00000425718 CLSTN2Q9H4D0 955 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 CDHR5Q9HBB8 845 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 CHST12Q9NRB3 414 aa26.53■■□□□ 1.84
APOE-202ENST00000425718 NOC2LQ9Y3T9 749 aaKnown RBP26.53■■□□□ 1.84
APOE-202ENST00000425718 SLC16A4O15374 487 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 NBNO60934 754 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 UBE4BO95155 1302 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 CSF2RAP15509 400 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 ITGB8P26012 769 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 MBTD1Q05BQ5 628 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 MBTPS1Q14703 1052 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 HAUS6Q7Z4H7 955 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 TMEM161BQ8NDZ6 487 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 CCDC51Q96ER9 411 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 POLD4Q9HCU8 107 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 PADI3Q9ULW8 664 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 EXOC7Q9UPT5 735 aa26.52■■□□□ 1.84
APOE-202ENST00000425718 DENND3A2RUS2 1198 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 RHOBTB3O94955 611 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 PRKCBP05771 671 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ZSCAN20P17040 1043 aaPredicted RBP26.51■■□□□ 1.83
APOE-202ENST00000425718 NFX1Q12986 1120 aaKnown RBP26.51■■□□□ 1.83
APOE-202ENST00000425718 PNOCQ13519 176 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ZNF720Q7Z2F6 126 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 FAM228AQ86W67 206 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 GPT2Q8TD30 523 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 TMEM40Q8WWA1 233 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ZNF668Q96K58 619 aaPredicted RBP26.51■■□□□ 1.83
APOE-202ENST00000425718 FZD8Q9H461 694 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ERVK-5Q9HDB9 667 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ST3GAL5Q9UNP4 418 aa26.51■■□□□ 1.83
APOE-202ENST00000425718 ACKR2O00590 384 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 EIF3DO15371 548 aaKnown RBP eCLIP26.5■■□□□ 1.83
APOE-202ENST00000425718 KLRC4O43908 158 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 BAIAP3O94812 1187 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 CD52P31358 61 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 GTF2BQ00403 316 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 EHHADHQ08426 723 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 IKBKEQ14164 716 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 KMT5BQ4FZB7 885 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 DEFB128Q7Z7B8 93 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms