RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 ERAP1Q9NZ08 941 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 HSPBP1Q9NZL4 362 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 CEP72Q9P209 647 aa16.62■□□□□ 0.25
ACTB-204ENST00000425660 HBP1O60381 514 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 MARK3P27448 753 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 HTRA3P83110 453 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 BFSP1Q12934 665 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 ADGRG1Q9Y653 693 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.61■□□□□ 0.25
ACTB-204ENST00000425660 GOLGA6L9A6NEM1 432 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 TMEM88BA6NKF7 163 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 IGHA2P01877 340 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 PTPN14Q15678 1187 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
ACTB-204ENST00000425660 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
ACTB-204ENST00000425660 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 SLC39A4Q6P5W5 647 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 FBXL18Q96ME1 805 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 CHP1Q99653 195 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 JPH2Q9BR39 696 aaPredicted RBP16.61■□□□□ 0.25
ACTB-204ENST00000425660 FBXL5Q9UKA1 691 aa16.61■□□□□ 0.25
ACTB-204ENST00000425660 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
ACTB-204ENST00000425660 PIGRP01833 764 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 TUBB4AP04350 444 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 LGALS2P05162 132 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 CCDC175P0C221 793 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 SMPD1P17405 629 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 CRHR2Q13324 411 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 IER5Q5VY09 327 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 TCP11Q8WWU5 503 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
ACTB-204ENST00000425660 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
ACTB-204ENST00000425660 GANQ9H2C0 597 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 ZNHIT6Q9NWK9 470 aaKnown RBP16.6■□□□□ 0.25
ACTB-204ENST00000425660 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
ACTB-204ENST00000425660 PCNTO95613 3336 aa16.6■□□□□ 0.25
ACTB-204ENST00000425660 TNNT1P13805 278 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 GARTP22102 1010 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 PON1P27169 355 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 FMO5P49326 533 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
ACTB-204ENST00000425660 AFG1LQ8WV93 481 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 SOCS4Q8WXH5 440 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 C16orf70Q9BSU1 422 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 LSM14BQ9BX40 385 aaKnown RBP16.59■□□□□ 0.25
ACTB-204ENST00000425660 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
ACTB-204ENST00000425660 CA12O43570 354 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 ENPEPQ07075 957 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 GRM1Q13255 1194 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 DRP2Q13474 957 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 CAPSQ13938 189 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 MXD4Q14582 209 aaPredicted RBP16.59■□□□□ 0.25
ACTB-204ENST00000425660 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 DESI2Q9BSY9 194 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 RNPEPQ9H4A4 650 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
ACTB-204ENST00000425660 LRRC53A6NM62 1247 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 PMM2O15305 246 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 ADCY3O60266 1144 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 NDUFA10O95299 355 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 KRT13P13646 458 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 STRN3Q13033 797 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 CDCA2Q69YH5 1023 aaPredicted RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 PRPF31Q8WWY3 499 aaKnown RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 PSPC1Q8WXF1 523 aaKnown RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.24
ACTB-204ENST00000425660 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 SIP14410 1827 aa16.58■□□□□ 0.24
ACTB-204ENST00000425660 LRRIQ4A6NIV6 560 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 K7ERI5 159 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 P4HA2O15460 535 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 ADCY6O43306 1168 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 UCHL3P15374 230 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 SLC9A1P19634 815 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 RGS2P41220 211 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 VAMP7P51809 220 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 EFNA5P52803 228 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 POLR2FP61218 127 aaKnown RBP16.57■□□□□ 0.24
ACTB-204ENST00000425660 CBWD6Q4V339 395 aa16.57■□□□□ 0.24
ACTB-204ENST00000425660 CBWD3Q5JTY5 395 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms