RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GCOM2Q9BZD3 368 aaPredicted RBP14.54□□□□□ -0.08
VRK3-203ENST00000424804 KCNH6Q9H252 994 aa14.54□□□□□ -0.08
VRK3-203ENST00000424804 DHX33Q9H6R0 707 aaKnown RBP14.54□□□□□ -0.08
VRK3-203ENST00000424804 NRDE2Q9H7Z3 1164 aa14.54□□□□□ -0.08
VRK3-203ENST00000424804 MINDY3Q9H8M7 445 aa14.54□□□□□ -0.08
VRK3-203ENST00000424804 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
VRK3-203ENST00000424804 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
VRK3-203ENST00000424804 KMT2EQ8IZD2 1858 aa14.54□□□□□ -0.08
VRK3-203ENST00000424804 FAM205CA6NFA0 338 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 TMEM221A6NGB7 291 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 M0R296 226 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 ZBTB39O15060 712 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 HOXA11P31270 313 aaPredicted RBP14.53□□□□□ -0.08
VRK3-203ENST00000424804 PPM1AP35813 382 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 KRT2P35908 639 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 AFF1P51825 1210 aaKnown RBP14.53□□□□□ -0.08
VRK3-203ENST00000424804 CDC42EP1Q00587 391 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 GUCY1B3Q02153 619 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 ST3GAL1Q11201 340 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 LETM2Q2VYF4 491 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 UBXN11Q5T124 520 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 IER5LQ5T953 404 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 AGMOQ6ZNB7 445 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 PIK3AP1Q6ZUJ8 805 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 ALYREFQ86V81 257 aaKnown RBP14.53□□□□□ -0.08
VRK3-203ENST00000424804 ZNF410Q86VK4 478 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 RHPN2Q8IUC4 686 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 TNFRSF25Q93038 417 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 RPGRIP1Q96KN7 1286 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 ZSCAN31Q96LW9 406 aaPredicted RBP14.53□□□□□ -0.08
VRK3-203ENST00000424804 FAM20AQ96MK3 541 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 CYP26B1Q9NR63 512 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 DACT1Q9NYF0 836 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 HCFC2Q9Y5Z7 792 aa14.53□□□□□ -0.08
VRK3-203ENST00000424804 ARID2Q68CP9 1835 aa14.52□□□□□ -0.08
VRK3-203ENST00000424804 CACNA1HO95180 2353 aa14.52□□□□□ -0.08
VRK3-203ENST00000424804 FSD2A1L4K1 749 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 GALTP07902 379 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.09
VRK3-203ENST00000424804 KRT17Q04695 432 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 LONRF3Q496Y0 759 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 KANK3Q6NY19 840 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 TMC7Q7Z402 723 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 MRPL10Q7Z7H8 261 aaKnown RBP14.52□□□□□ -0.09
VRK3-203ENST00000424804 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 ABI1Q8IZP0 508 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 FAM184AQ8NB25 1140 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 PRSS33Q8NF86 280 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 SLC22A17Q8WUG5 538 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 ZBP1Q9H171 429 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 ENTPD7Q9NQZ7 604 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 FAM105AQ9NUU6 356 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 DNAJB4Q9UDY4 337 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 IRAK3Q9Y616 596 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 USP34Q70CQ2 3546 aa14.52□□□□□ -0.09
VRK3-203ENST00000424804 DDHD2O94830 711 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 CXCL14O95715 111 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 P4HBP07237 508 aaKnown RBP14.51□□□□□ -0.09
VRK3-203ENST00000424804 HOXB8P17481 243 aaPredicted RBP14.51□□□□□ -0.09
VRK3-203ENST00000424804 DNM2P50570 870 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 NR5A1Q13285 461 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 SMC1AQ14683 1233 aaKnown RBP14.51□□□□□ -0.09
VRK3-203ENST00000424804 EPHA7Q15375 998 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 NEK8Q86SG6 692 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 C4orf19Q8IY42 314 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 PRPF31Q8WWY3 499 aaKnown RBP14.51□□□□□ -0.09
VRK3-203ENST00000424804 AUTS2Q8WXX7 1259 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 IGSF21Q96ID5 467 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 MFSD14AQ96MC6 490 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 SH2B1Q9NRF2 756 aaPredicted RBP14.51□□□□□ -0.09
VRK3-203ENST00000424804 RGL1Q9NZL6 768 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 DMDP11532 3685 aa14.51□□□□□ -0.09
VRK3-203ENST00000424804 WNT7AO00755 349 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 TBX3O15119 743 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 MARCH6O60337 910 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 CCNT1O60563 726 aaKnown RBP14.5□□□□□ -0.09
VRK3-203ENST00000424804 LILRB3O75022 631 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 EFEMP2O95967 443 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 SFPQP23246 707 aaKnown RBP eCLIP14.5□□□□□ -0.09
VRK3-203ENST00000424804 SLC11A1P49279 550 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
VRK3-203ENST00000424804 DDX53Q86TM3 631 aaKnown RBP14.5□□□□□ -0.09
VRK3-203ENST00000424804 POTEDQ86YR6 584 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 VPS52Q8N1B4 723 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 CASP10Q92851 521 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 TMEM143Q96AN5 459 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 NLRP4Q96MN2 994 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 PHOX2BQ99453 314 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 MRPL9Q9BYD2 267 aaKnown RBP14.5□□□□□ -0.09
VRK3-203ENST00000424804 ADAM7Q9H2U9 754 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 POMKQ9H5K3 350 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 XPNPEP1Q9NQW7 623 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms