RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 LRIT3Q3SXY7 679 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.06■■■□□ 2.084e-8■■■□□ 17.1
TSPAN3-203ENST00000424443 CEP57L1Q8IYX8 460 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 FSIP1Q8NA03 581 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 MRPS27Q92552 414 aaKnown RBP28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 ADAM2Q99965 735 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 TNMDQ9H2S6 317 aa28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 PIN4Q9Y237 131 aaKnown RBP28.06■■■□□ 2.08
TSPAN3-203ENST00000424443 PLS3P13797 630 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 SMTNP53814 917 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 DEFB103AP81534 67 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 GIT2Q14161 759 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 DYMQ7RTS9 669 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 DDX12PQ92771 950 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 TSPYL2Q9H2G4 693 aaPredicted RBP28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 MAGEF1Q9HAY2 307 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 KMT5AQ9NQR1 393 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 CHST12Q9NRB3 414 aa28.05■■■□□ 2.08
TSPAN3-203ENST00000424443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 NPTX2P47972 431 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 EFNA5P52803 228 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 HABP4Q5JVS0 413 aaKnown RBP28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 CDCA2Q69YH5 1023 aaPredicted RBP28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 ZBED2Q9BTP6 218 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 PARVGQ9HBI0 331 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 C1orf112Q9NSG2 853 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 RNF216Q9NWF9 866 aaPredicted RBP28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 DACT1Q9NYF0 836 aa28.04■■■□□ 2.08
TSPAN3-203ENST00000424443 TRIOBPQ9H2D6 2365 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 IBSPP21815 317 aaPredicted RBP28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 SYKP43405 635 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 MBTD1Q05BQ5 628 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 MYCT1Q8N699 235 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 RGS18Q9NS28 235 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 MYH11P35749 1972 aa28.03■■■□□ 2.08
TSPAN3-203ENST00000424443 MYMKA6NI61 221 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 UPP2O95045 317 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 LIG1P18858 919 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 MAPK6Q16659 721 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 TWF2Q6IBS0 349 aaKnown RBP28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 RTN4RL1Q86UN2 441 aaPredicted RBP28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 LINC01599Q8WXQ3 324 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 KIFC3Q9BVG8 833 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 AGPAT5Q9NUQ2 364 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 PRMT7Q9NVM4 692 aaPredicted RBP28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 USP25Q9UHP3 1055 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 MGEA5O60502 916 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 NDUFA8P51970 172 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 TMEM132AQ24JP5 1023 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 FAM117BQ6P1L5 589 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 SLC24A5Q71RS6 500 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 HERC6Q8IVU3 1022 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 STAMQ92783 540 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 KBTBD4Q9NVX7 518 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 LRFN2Q9ULH4 789 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 HPSEQ9Y251 543 aa28.02■■■□□ 2.08
TSPAN3-203ENST00000424443 PHLPP2Q6ZVD8 1323 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 K7ERI5 159 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 AXLP30530 894 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 SMAD3P84022 425 aaKnown RBP28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 DSC3Q14574 896 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 SPIRE2Q8WWL2 714 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 TOP1MTQ969P6 601 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 PRIMPOLQ96LW4 560 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 SERTAD1Q9UHV2 236 aa28.01■■■□□ 2.07
TSPAN3-203ENST00000424443 GRXCR1A8MXD5 290 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 H0YCG3 227 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 SLC16A4O15374 487 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 PRKCBP05771 671 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 STAG3L1P0CL83 205 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 IDEP14735 1019 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 SARSP49591 514 aaKnown RBP28■■■□□ 2.07
TSPAN3-203ENST00000424443 FAM109BQ6ICB4 259 aaPredicted RBP28■■■□□ 2.07
TSPAN3-203ENST00000424443 NTPCRQ9BSD7 190 aaKnown RBP28■■■□□ 2.07
TSPAN3-203ENST00000424443 MSRAQ9UJ68 235 aa28■■■□□ 2.07
TSPAN3-203ENST00000424443 FAM237AA0A1B0GTK4 181 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 TSPAN1O60635 241 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 SLFN14P0C7P3 912 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 ZNF131P52739 623 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 NOTUMQ6P988 496 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 TMCO2Q7Z6W1 182 aaPredicted RBP27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 FZD8Q9H461 694 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 PCDHB7Q9Y5E2 793 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 ADGRA3Q8IWK6 1321 aa27.99■■■□□ 2.07
TSPAN3-203ENST00000424443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 TLL1O43897 1013 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 TRAK2O60296 914 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 GJB5O95377 273 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 AFMP43652 599 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 RAB30Q15771 203 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 FAM187BQ17R55 369 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 NPAS4Q8IUM7 802 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 FAM178BQ8IXR5 827 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 CCDC34Q96HJ3 373 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 GOLPH3LQ9H4A5 285 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 TMEM134Q9H6X4 195 aa27.98■■■□□ 2.07
TSPAN3-203ENST00000424443 SKIP12755 728 aa27.97■■■□□ 2.07
TSPAN3-203ENST00000424443 GAP43P17677 238 aa27.97■■■□□ 2.07
TSPAN3-203ENST00000424443 RABGGTBP53611 331 aa27.97■■■□□ 2.07
TSPAN3-203ENST00000424443 STRN3Q13033 797 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms