RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FAM13AO94988 1023 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 MMEP08473 750 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 BCRP11274 1271 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 SLC16A2P36021 539 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 ALCAMQ13740 583 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 ZNF720Q7Z2F6 126 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 GBP7Q8N8V2 638 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-204ENST00000424143 STRA6Q9BX79 667 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
C9orf3-204ENST00000424143 BHMT2Q9H2M3 363 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 PARVGQ9HBI0 331 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 OSGEPQ9NPF4 335 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
C9orf3-204ENST00000424143 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 NR2E1Q9Y466 385 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 ALG6Q9Y672 507 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
C9orf3-204ENST00000424143 TCEA3O75764 348 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 ELF1P32519 619 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 PEX5P50542 639 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
C9orf3-204ENST00000424143 ELF3P78545 371 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-204ENST00000424143 PPP2R5CQ13362 524 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 CTTNQ14247 550 aaKnown RBP16.43■□□□□ 0.22
C9orf3-204ENST00000424143 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 SYDE1Q6ZW31 735 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-204ENST00000424143 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 PRELID2Q8N945 189 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 LMO3Q8TAP4 145 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 ART4Q93070 314 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 FIZ1Q96SL8 496 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 INTS9Q9NV88 658 aaKnown RBP16.43■□□□□ 0.22
C9orf3-204ENST00000424143 HAUS2Q9NVX0 235 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 SAMD15Q9P1V8 674 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
C9orf3-204ENST00000424143 LOC102724159A0A0B4J2E5 919 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 FAM86B1E9PN63 330 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 RTN2O75298 545 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
C9orf3-204ENST00000424143 FAM86B2P0C5J1 330 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 NF2P35240 595 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 PDE6CP51160 858 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 GPC5P78333 572 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 PWP2Q15269 919 aaKnown RBP16.42■□□□□ 0.22
C9orf3-204ENST00000424143 SPRED3Q2MJR0 410 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 GJB7Q6PEY0 223 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 FBXO11Q86XK2 927 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 ALG3Q92685 438 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 CD101Q93033 1021 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 HOMER3Q9NSC5 361 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
C9orf3-204ENST00000424143 CCNL1Q9UK58 526 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-204ENST00000424143 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
C9orf3-204ENST00000424143 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 ATP5DP30049 168 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 PLTPP55058 493 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 EIF6P56537 245 aaKnown RBP16.41■□□□□ 0.22
C9orf3-204ENST00000424143 ZNF268Q14587 947 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-204ENST00000424143 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 TLDC1Q6P9B6 456 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 FBXO25Q8TCJ0 367 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 HOOK2Q96ED9 719 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SERPINB12Q96P63 405 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 GPR101Q96P66 508 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-204ENST00000424143 ERVK-5Q9HDB9 667 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 WHRNQ9P202 907 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 AFF2P51816 1311 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 IGSF9BQ9UPX0 1349 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 O00370 1275 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 MEIS1O00470 390 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 CLIC2O15247 247 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 RIPK2O43353 540 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SHBGP04278 402 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 ALADP13716 330 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SLC8A3P57103 927 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 MYL7Q01449 175 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 CETN1Q12798 172 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 MKRN3Q13064 507 aaKnown RBP16.41■□□□□ 0.22
C9orf3-204ENST00000424143 PICALMQ13492 652 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SLC29A2Q14542 456 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 VPS72Q15906 364 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 GALNTL6Q49A17 601 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 TRPM8Q7Z2W7 1104 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 CCDC63Q8NA47 563 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 MDM1Q8TC05 714 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms