RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PTPN22Q9Y2R2 807 aa6.96□□□□□ -1.3
LINC00458-201ENST00000423442 KIAA0100Q14667 2235 aaKnown RBP6.95□□□□□ -1.3
LINC00458-201ENST00000423442 GNAI3P08754 354 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 GUCY2CP25092 1073 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 GJA9P57773 515 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 STRIP1Q5VSL9 837 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 ADCY4Q8NFM4 1077 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 CD99L2Q8TCZ2 262 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 TSPAN17Q96FV3 270 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 GMLQ99445 158 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF214Q9UL59 606 aaPredicted RBP6.95□□□□□ -1.3
LINC00458-201ENST00000423442 MROH5Q6ZUA9 1318 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 KIF16BQ96L93 1317 aa6.95□□□□□ -1.3
LINC00458-201ENST00000423442 TRIOBPQ9H2D6 2365 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 STXBP3O00186 592 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 MYO1BO43795 1136 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 ITGB3P05106 788 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 SARSP49591 514 aaKnown RBP6.94□□□□□ -1.3
LINC00458-201ENST00000423442 RBM5P52756 815 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00458-201ENST00000423442 RARSP54136 660 aaKnown RBP6.94□□□□□ -1.3
LINC00458-201ENST00000423442 ADAM17P78536 824 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 UBE4AQ14139 1066 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 METTL24Q5JXM2 366 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 CABP7Q86V35 215 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 LZTR1Q8N653 840 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 TMEM87AQ8NBN3 555 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 SUCLG2Q96I99 432 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 BICC1Q9H694 974 aaKnown RBP6.94□□□□□ -1.3
LINC00458-201ENST00000423442 FZD1Q9UP38 647 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 DIS3Q9Y2L1 958 aaKnown RBP6.94□□□□□ -1.3
LINC00458-201ENST00000423442 UTYO14607 1347 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 PSME4Q14997 1843 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 MED23Q9ULK4 1368 aa6.94□□□□□ -1.3
LINC00458-201ENST00000423442 AURKAO14965 403 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 IFIT1P09914 478 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 HIBADHP31937 336 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 NF2P35240 595 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 RBM25P49756 843 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 SMAD4Q13485 552 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 TCEAL1Q15170 157 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 EPHA10Q5JZY3 1008 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ZKSCAN2Q63HK3 967 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 EEF1DP3Q658K8 133 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ARMC9Q7Z3E5 817 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF761Q86XN6 746 aaPredicted RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 FTSJ3Q8IY81 847 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ERO1AQ96HE7 468 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 RBM15Q96T37 977 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 CD209Q9NNX6 404 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
LINC00458-201ENST00000423442 SMPD4Q9NXE4 827 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 NTMQ9P121 344 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 A0A0C4DFX4 3053 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 COL6A3P12111 3177 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF609O15014 1411 aa6.93□□□□□ -1.3
LINC00458-201ENST00000423442 MANSC4A6NHS7 340 aaPredicted RBP6.92□□□□□ -1.3
LINC00458-201ENST00000423442 PDE8BO95263 885 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 TNFRSF1AP19438 455 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 INHBEP58166 350 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 CACNB2Q08289 660 aaPredicted RBP6.92□□□□□ -1.3
LINC00458-201ENST00000423442 DLGAP5Q15398 846 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 DPY19L1Q2PZI1 675 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 ATF7IPQ6VMQ6 1270 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 C15orf52Q6ZUT6 534 aaKnown RBP6.92□□□□□ -1.3
LINC00458-201ENST00000423442 RBBP8NLQ8NC74 664 aaPredicted RBP6.92□□□□□ -1.3
LINC00458-201ENST00000423442 CPA5Q8WXQ8 436 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 DDX11Q96FC9 970 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 PEX11GQ96HA9 241 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF333Q96JL9 665 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 HAUS7Q99871 368 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 SYT3Q9BQG1 590 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 MTA3Q9BTC8 594 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 MXD3Q9BW11 206 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
LINC00458-201ENST00000423442 CEP290O15078 2479 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 WNT10BO00744 389 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 BCAR3O75815 825 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 SLC5A1P13866 664 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 IL1R1P14778 569 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 SP3Q02447 781 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 CRHR2Q13324 411 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 RABL6Q3YEC7 729 aaPredicted RBP6.91□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF394Q53GI3 561 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 DACT2Q5SW24 774 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 GORABQ5T7V8 394 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 NETO2Q8NC67 525 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 TBC1D22AQ8WUA7 517 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 PUS3Q9BZE2 481 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms