RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 EXOC8Q8IYI6 725 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 GJD3Q8N144 294 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 EFHBQ8N7U6 833 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 ZNF558Q96NG5 402 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 MTRQ99707 1265 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 TRAIPQ9BWF2 469 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 SH2B1Q9NRF2 756 aaPredicted RBP16.94■□□□□ 0.3
USB1-202ENST00000423271 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 FAM105AQ9NUU6 356 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 PER2O15055 1255 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 MBTPS2O43462 519 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 RBM10P98175 930 aaKnown RBP16.93■□□□□ 0.3
USB1-202ENST00000423271 PLPP4Q5VZY2 271 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 RNF149Q8NC42 400 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 TCP11Q8WWU5 503 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 MRPS27Q92552 414 aaKnown RBP16.93■□□□□ 0.3
USB1-202ENST00000423271 MSLNLQ96KJ4 702 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 TLE6Q9H808 572 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 CLEC1BQ9P126 229 aa16.93■□□□□ 0.3
USB1-202ENST00000423271 BARX2Q9UMQ3 279 aaPredicted RBP16.93■□□□□ 0.3
USB1-202ENST00000423271 GAS2O43903 313 aaKnown RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 RARRES1P49788 294 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 PLCB3Q01970 1234 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 ZP2Q05996 745 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 SMAD4Q13485 552 aaKnown RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 ZNF174Q15697 407 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 SLC39A11Q8N1S5 342 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 FBXO18Q8NFZ0 1043 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 VN1R2Q8NFZ6 395 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 ASAP3Q8TDY4 903 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 PIGOQ8TEQ8 1089 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 TMX3Q96JJ7 454 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 TCF25Q9BQ70 676 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 MRPL9Q9BYD2 267 aaKnown RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
USB1-202ENST00000423271 ANKEF1Q9NU02 776 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 FAM50BQ9Y247 325 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 INPP5FQ9Y2H2 1132 aa16.92■□□□□ 0.3
USB1-202ENST00000423271 NT5C1B-RDH14C9J2C7 533 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 HOXA11P31270 313 aaPredicted RBP16.91■□□□□ 0.3
USB1-202ENST00000423271 PPM1AP35813 382 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 MCM2P49736 904 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 RAB27AP51159 221 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 BCAR1P56945 870 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 SMAD2Q15796 467 aaKnown RBP16.91■□□□□ 0.3
USB1-202ENST00000423271 DUSP6Q16828 381 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 UBXN11Q5T124 520 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
USB1-202ENST00000423271 ENTPD7Q9NQZ7 604 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 RAPGEFL1Q9UHV5 662 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 PCDHB2Q9Y5E7 798 aa16.91■□□□□ 0.3
USB1-202ENST00000423271 HIDE1A8MVS5 230 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 ASAP2O43150 1006 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 B4GALT3O60512 393 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
USB1-202ENST00000423271 ZNF623O75123 536 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 ZC3H11AO75152 810 aaKnown RBP eCLIP16.9■□□□□ 0.3
USB1-202ENST00000423271 MED24O75448 989 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 DGAT1O75907 488 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 SKIP12755 728 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 TECP42680 631 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 CAPSQ13938 189 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 NBR1Q14596 966 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 GLB1LQ6UWU2 654 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
USB1-202ENST00000423271 NOSTRINQ8IVI9 506 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 ADHFE1Q8IWW8 467 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 C1QTNF1Q9BXJ1 281 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 TBC1D13Q9NVG8 400 aa16.9■□□□□ 0.3
USB1-202ENST00000423271 PUF60Q9UHX1 559 aaKnown RBP16.9■□□□□ 0.3
USB1-202ENST00000423271 TSPAN1O60635 241 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 OFD1O75665 1012 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 EYA4O95677 639 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 COL9A1P20849 921 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 GLRA2P23416 452 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 ARL2P36404 184 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 AFF1P51825 1210 aaKnown RBP16.89■□□□□ 0.29
USB1-202ENST00000423271 PTENP60484 403 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 KRT17Q04695 432 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 GNL2Q13823 731 aaKnown RBP16.89■□□□□ 0.29
USB1-202ENST00000423271 MXD4Q14582 209 aaPredicted RBP16.89■□□□□ 0.29
USB1-202ENST00000423271 NOMO2Q5JPE7 1267 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 PDE12Q6L8Q7 609 aaKnown RBP16.89■□□□□ 0.29
USB1-202ENST00000423271 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 AGMOQ6ZNB7 445 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 SMRP1Q8NCR6 262 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 BCL7CQ8WUZ0 217 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms