RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 KIFC3Q9BVG8 833 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 C2orf40Q9H1Z8 148 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 MINDY3Q9H8M7 445 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 ARHGAP28Q9P2N2 729 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 SEL1LQ9UBV2 794 aa18.76■□□□□ 0.59
COL7A1-202ENST00000422991 NOC2LQ9Y3T9 749 aaKnown RBP18.76■□□□□ 0.59
COL7A1-202ENST00000422991 PVALEFA0A1B0GWK0 134 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 CCDC169A6NNP5 214 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 RBAK-RBAKDNI3L0D1 243 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 KLRC4O43908 158 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 MBD3O95983 291 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 CSF2RAP15509 400 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL7A1-202ENST00000422991 NCKAP1LP55160 1127 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 MBTD1Q05BQ5 628 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 EHHADHQ08426 723 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 PNOCQ13519 176 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 FAM228AQ86W67 206 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 ZBTB8OSQ8IWT0 167 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 USP38Q8NB14 1042 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 NTPCRQ9BSD7 190 aaKnown RBP18.75■□□□□ 0.59
COL7A1-202ENST00000422991 AGO3Q9H9G7 860 aaKnown RBP18.75■□□□□ 0.59
COL7A1-202ENST00000422991 KMT5AQ9NQR1 393 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 OLFML3Q9NRN5 406 aa18.75■□□□□ 0.59
COL7A1-202ENST00000422991 HOOK1Q9UJC3 728 aaKnown RBP18.75■□□□□ 0.59
COL7A1-202ENST00000422991 SLC16A4O15374 487 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 TRAK2O60296 914 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 CSDE1O75534 798 aaKnown RBP18.74■□□□□ 0.59
COL7A1-202ENST00000422991 RPS6KA5O75582 802 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 CD52P31358 61 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 EFNA5P52803 228 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 SMTNP53814 917 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 FPGSQ05932 587 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 PPIGQ13427 754 aaKnown RBP eCLIP18.74■□□□□ 0.596e-10■■■■■ 30
COL7A1-202ENST00000422991 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
COL7A1-202ENST00000422991 FAM178BQ8IXR5 827 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 TMEM161BQ8NDZ6 487 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
COL7A1-202ENST00000422991 CCDC113Q9H0I3 377 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 ERVK-5Q9HDB9 667 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 KCNG1Q9UIX4 513 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
COL7A1-202ENST00000422991 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 K7ENM7 598 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 RPN1P04843 607 aaKnown RBP18.73■□□□□ 0.59
COL7A1-202ENST00000422991 MAPTP10636 758 aaKnown RBP18.73■□□□□ 0.59
COL7A1-202ENST00000422991 PTMSP20962 102 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 FGFR4P22455 802 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 SFPQP23246 707 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL7A1-202ENST00000422991 PAK2Q13177 524 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 PLEKHG4Q58EX7 1191 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 DEFB128Q7Z7B8 93 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 SLC17A8Q8NDX2 589 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 KCNN1Q92952 543 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
COL7A1-202ENST00000422991 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
COL7A1-202ENST00000422991 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 PADI3Q9ULW8 664 aa18.73■□□□□ 0.59
COL7A1-202ENST00000422991 H0YCG3 227 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 INO80B-WBP1J3KQ70 363 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 PFKMP08237 780 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 SCP2P22307 547 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 NMT1P30419 496 aaKnown RBP18.72■□□□□ 0.59
COL7A1-202ENST00000422991 PCBP1Q15365 356 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL7A1-202ENST00000422991 AMHR2Q16671 573 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 KMT5BQ4FZB7 885 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 FAM26FQ5R3K3 315 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 TAS1R3Q7RTX0 852 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 HAUS6Q7Z4H7 955 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 SPATA20Q8TB22 786 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 HPS3Q969F9 1004 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 FGFBP2Q9BYJ0 223 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 UBE2OQ9C0C9 1292 aaKnown RBP18.72■□□□□ 0.59
COL7A1-202ENST00000422991 FZD8Q9H461 694 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 ST6GALNAC4Q9H4F1 302 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 TMEM134Q9H6X4 195 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 MRPL44Q9H9J2 332 aaKnown RBP18.72■□□□□ 0.59
COL7A1-202ENST00000422991 EXOC1Q9NV70 894 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 TBC1D7Q9P0N9 293 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 ST3GAL5Q9UNP4 418 aa18.72■□□□□ 0.59
COL7A1-202ENST00000422991 DENND3A2RUS2 1198 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 GPR182O15218 404 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 PPP1R37O75864 691 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 SMC2O95347 1197 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 PRKCBP05771 671 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 KCNB1Q14721 858 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 CAMK4Q16566 473 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 MAPK6Q16659 721 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 FAM187BQ17R55 369 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 TCTN1Q2MV58 587 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 CATSPER4Q7RTX7 472 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 ZNF720Q7Z2F6 126 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 RPUSD2Q8IZ73 545 aaKnown RBP18.71■□□□□ 0.59
COL7A1-202ENST00000422991 DBF4BQ8NFT6 615 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 SEPT8Q92599 483 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 APBB2Q92870 758 aa18.71■□□□□ 0.59
COL7A1-202ENST00000422991 ERCC4Q92889 916 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms