RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 FGFR1P11362 822 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 CAPSQ13938 189 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 CAMK1Q14012 370 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 AMHR2Q16671 573 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 FAM43BQ6ZT52 329 aaPredicted RBP11.02□□□□□ -0.65
NF1-203ENST00000422121 TMEM192Q8IY95 271 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 GDPD5Q8WTR4 605 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 PSPC1Q8WXF1 523 aaKnown RBP11.02□□□□□ -0.65
NF1-203ENST00000422121 MTRQ99707 1265 aa11.02□□□□□ -0.65
NF1-203ENST00000422121 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.65
NF1-203ENST00000422121 GCOM2Q9BZD3 368 aaPredicted RBP11.02□□□□□ -0.65
NF1-203ENST00000422121 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 MEIS3P2A8K0S8 358 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 E9PMD0 336 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 H3BNC9 293 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 SNPHO15079 494 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 ASAP2O43150 1006 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 GAS2O43903 313 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 MUTP22033 750 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 IGFBP4P22692 258 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 BMPR1AP36894 532 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 CCT6AP40227 531 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 PTENP60484 403 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 POU5F1BQ06416 359 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 CLLU1OSQ5K130 101 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 HYIQ5T013 277 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 UBXN11Q5T124 520 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 MAEAQ7L5Y9 396 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 FIBCD1Q8N539 461 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 TCP11Q8WWU5 503 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 ELAC1Q9H777 363 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 ATP6V0A4Q9HBG4 840 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 DDX19AQ9NUU7 478 aaKnown RBP11.01□□□□□ -0.65
NF1-203ENST00000422121 TMEM161AQ9NX61 479 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 PCDHB7Q9Y5E2 793 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 CLIC4Q9Y696 253 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 ADGRA3Q8IWK6 1321 aa11.01□□□□□ -0.65
NF1-203ENST00000422121 VWA3AA6NCI4 1184 aa11□□□□□ -0.65
NF1-203ENST00000422121 GRM6O15303 877 aa11□□□□□ -0.65
NF1-203ENST00000422121 USO1O60763 962 aaKnown RBP11□□□□□ -0.65
NF1-203ENST00000422121 EDN1P05305 212 aa11□□□□□ -0.65
NF1-203ENST00000422121 CYP11B2P19099 503 aa11□□□□□ -0.65
NF1-203ENST00000422121 PDCP20941 246 aa11□□□□□ -0.65
NF1-203ENST00000422121 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
NF1-203ENST00000422121 DNAJB1P25685 340 aa11□□□□□ -0.65
NF1-203ENST00000422121 AFF1P51825 1210 aaKnown RBP11□□□□□ -0.65
NF1-203ENST00000422121 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
NF1-203ENST00000422121 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
NF1-203ENST00000422121 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
NF1-203ENST00000422121 ODR4Q5SWX8 454 aa11□□□□□ -0.65
NF1-203ENST00000422121 USP49Q70CQ1 688 aa11□□□□□ -0.65
NF1-203ENST00000422121 SRGAP1Q7Z6B7 1085 aa11□□□□□ -0.65
NF1-203ENST00000422121 EXOC8Q8IYI6 725 aa11□□□□□ -0.65
NF1-203ENST00000422121 CMTR2Q8IYT2 770 aaKnown RBP11□□□□□ -0.65
NF1-203ENST00000422121 DAW1Q8N136 415 aa11□□□□□ -0.65
NF1-203ENST00000422121 ERMNQ8TAM6 284 aa11□□□□□ -0.65
NF1-203ENST00000422121 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
NF1-203ENST00000422121 CASD1Q96PB1 797 aa11□□□□□ -0.65
NF1-203ENST00000422121 GAS2L1Q99501 681 aaPredicted RBP11□□□□□ -0.65
NF1-203ENST00000422121 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
NF1-203ENST00000422121 BHMT2Q9H2M3 363 aa11□□□□□ -0.65
NF1-203ENST00000422121 CWH43Q9H720 699 aa11□□□□□ -0.65
NF1-203ENST00000422121 AGPAT5Q9NUQ2 364 aa11□□□□□ -0.65
NF1-203ENST00000422121 TYW1Q9NV66 732 aaKnown RBP11□□□□□ -0.65
NF1-203ENST00000422121 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
NF1-203ENST00000422121 C5orf42Q9H799 3197 aa11□□□□□ -0.65
NF1-203ENST00000422121 COL4A4P53420 1690 aaPredicted RBP10.99□□□□□ -0.65
NF1-203ENST00000422121 MYO7AQ13402 2215 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 B4GALT5O43286 388 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 STX6O43752 255 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 TSPAN1O60635 241 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 ZNF623O75123 536 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 EYA4O95677 639 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
NF1-203ENST00000422121 PHKA2P46019 1235 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 MAPK7Q13164 816 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 PKP1Q13835 747 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 MXD4Q14582 209 aaPredicted RBP10.99□□□□□ -0.65
NF1-203ENST00000422121 TMEM119Q4V9L6 283 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 HAUS3Q68CZ6 603 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 CATSPER4Q7RTX7 472 aa10.99□□□□□ -0.65
NF1-203ENST00000422121 MRPL10Q7Z7H8 261 aaKnown RBP10.99□□□□□ -0.65
NF1-203ENST00000422121 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms