RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 K7ENM7 598 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 SLC16A4O15374 487 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 KLRC4O43908 158 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 CSDE1O75534 798 aaKnown RBP19.34■□□□□ 0.69
LINC00271-201ENST00000421378 SMC2O95347 1197 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 EFNA5P52803 228 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 NCKAP1LP55160 1127 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 NFKBIBQ15653 356 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 KMT5BQ4FZB7 885 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 TSHZ1Q6ZSZ6 1077 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 SLC17A8Q8NDX2 589 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 CCDC47Q96A33 483 aaKnown RBP19.34■□□□□ 0.69
LINC00271-201ENST00000421378 FIZ1Q96SL8 496 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 PCDH10Q9P2E7 1040 aa19.34■□□□□ 0.69
LINC00271-201ENST00000421378 NBNO60934 754 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 RPS6KA5O75582 802 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.69
LINC00271-201ENST00000421378 RFC2P35250 354 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 MBTD1Q05BQ5 628 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 EHHADHQ08426 723 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 LPIN1Q14693 890 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 TMEM161BQ8NDZ6 487 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 GSDMAQ96QA5 445 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 MINDY3Q9H8M7 445 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.69
LINC00271-201ENST00000421378 PCDHA5Q9Y5H7 936 aa19.33■□□□□ 0.69
LINC00271-201ENST00000421378 PHLPP2Q6ZVD8 1323 aa19.33■□□□□ 0.68
LINC00271-201ENST00000421378 MAPTP10636 758 aaKnown RBP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 CSF2RAP15509 400 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 SCP2P22307 547 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 NMT1P30419 496 aaKnown RBP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 PAK2Q13177 524 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 KCNB1Q14721 858 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 GPNMBQ14956 572 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 MAPK6Q16659 721 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 KLHL40Q2TBA0 621 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 FAM26FQ5R3K3 315 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 HAUS6Q7Z4H7 955 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 SPATA20Q8TB22 786 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 BADQ92934 168 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 HPS3Q969F9 1004 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 IFIH1Q9BYX4 1025 aaKnown RBP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 OSBPL7Q9BZF2 842 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 AGO3Q9H9G7 860 aaKnown RBP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 SCN5AQ14524 2016 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 TNRC18O15417 2968 aaPredicted RBP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 DENND3A2RUS2 1198 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 K7ERI5 159 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 ERLIN2O94905 339 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 RHOBTB3O94955 611 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 GCNT3O95395 438 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 ABCD1P33897 745 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 PCBP1Q15365 356 aaKnown RBP eCLIP19.32■□□□□ 0.68
LINC00271-201ENST00000421378 ZNF720Q7Z2F6 126 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 DEFB128Q7Z7B8 93 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 FAM228AQ86W67 206 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
LINC00271-201ENST00000421378 GPR182O15218 404 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 CXCL10P02778 98 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 FGFR4P22455 802 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 CD52P31358 61 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 NFX1Q12986 1120 aaKnown RBP19.31■□□□□ 0.68
LINC00271-201ENST00000421378 NT5DC1Q5TFE4 455 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 CATSPER4Q7RTX7 472 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 LBHD1Q9BQE6 289 aaPredicted RBP19.31■□□□□ 0.68
LINC00271-201ENST00000421378 TMEM134Q9H6X4 195 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 PRMT7Q9NVM4 692 aaPredicted RBP19.31■□□□□ 0.68
LINC00271-201ENST00000421378 PADI3Q9ULW8 664 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 ST3GAL5Q9UNP4 418 aa19.31■□□□□ 0.68
LINC00271-201ENST00000421378 PRKCBP05771 671 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 SARSP49591 514 aaKnown RBP19.3■□□□□ 0.68
LINC00271-201ENST00000421378 CASP5P51878 434 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 GTF2BQ00403 316 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 FPGSQ05932 587 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 STRN3Q13033 797 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 PSMD2Q13200 908 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 ALCAMQ13740 583 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 SKOR2Q2VWA4 1001 aaPredicted RBP19.3■□□□□ 0.68
LINC00271-201ENST00000421378 PLEKHG4Q58EX7 1191 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 STXBP4Q6ZWJ1 553 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 KCNN1Q92952 543 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 SYAP1Q96A49 352 aaPredicted RBP19.3■□□□□ 0.68
LINC00271-201ENST00000421378 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 FGFBP2Q9BYJ0 223 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 FZD8Q9H461 694 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 SLC39A2Q9NP94 309 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 KIAA1468Q9P260 1216 aa19.3■□□□□ 0.68
LINC00271-201ENST00000421378 RBAK-RBAKDNI3L0D1 243 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 PPP1R37O75864 691 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 PFKMP08237 780 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 MYBP10242 640 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 STK4Q13043 487 aa19.29■□□□□ 0.68
LINC00271-201ENST00000421378 PPIGQ13427 754 aaKnown RBP eCLIP19.29■□□□□ 0.68
LINC00271-201ENST00000421378 FAM187BQ17R55 369 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms