RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 LONRF3Q496Y0 759 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 EPC2Q52LR7 807 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 USP49Q70CQ1 688 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 IFNLR1Q8IU57 520 aaPredicted RBP17.56■□□□□ 0.4
VAT1-202ENST00000420567 TMEM192Q8IY95 271 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 MAFAQ8NHW3 353 aaPredicted RBP17.56■□□□□ 0.4
VAT1-202ENST00000420567 CPB2Q96IY4 423 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 EPSTI1Q96J88 318 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 KIFC3Q9BVG8 833 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
VAT1-202ENST00000420567 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
VAT1-202ENST00000420567 SRPRBQ9Y5M8 271 aaKnown RBP17.56■□□□□ 0.4
VAT1-202ENST00000420567 LOXHD1Q8IVV2 1947 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 B4GALT5O43286 388 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 LPXNO60711 386 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 HIP1RO75146 1068 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 PLA2G4BP0C869 781 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 PDIA4P13667 645 aaKnown RBP17.55■□□□□ 0.4
VAT1-202ENST00000420567 LIG1P18858 919 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 PLCG1P19174 1290 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 HOXA11P31270 313 aaPredicted RBP17.55■□□□□ 0.4
VAT1-202ENST00000420567 RAD51AP2Q09MP3 1159 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 AMHR2Q16671 573 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 CDCA2Q69YH5 1023 aaPredicted RBP17.55■□□□□ 0.4
VAT1-202ENST00000420567 C1orf186Q6ZWK4 172 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 ZNF598Q86UK7 904 aaKnown RBP17.55■□□□□ 0.4
VAT1-202ENST00000420567 ZBTB8OSQ8IWT0 167 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 DEPTORQ8TB45 409 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 PPM1EQ8WY54 764 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
VAT1-202ENST00000420567 KIFAP3Q92845 792 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 LPPQ93052 612 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 NFKBIZQ9BYH8 718 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 FAM105AQ9NUU6 356 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 HCSTQ9UBK5 93 aa17.55■□□□□ 0.4
VAT1-202ENST00000420567 SLC26A4O43511 780 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 NAMPTP43490 491 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 SLC12A3P55017 1021 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 MAPK7Q13164 816 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 BECN1Q14457 450 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 CDR2LQ86X02 465 aaPredicted RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 DAW1Q8N136 415 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 KCTD17Q8N5Z5 321 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 KRI1Q8N9T8 703 aaKnown RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 HELQQ8TDG4 1101 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 IFT74Q96LB3 600 aa17.54■□□□□ 0.4
VAT1-202ENST00000420567 COL4A4P53420 1690 aaPredicted RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 LAMA2P24043 3122 aaKnown RBP17.54■□□□□ 0.4
VAT1-202ENST00000420567 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 MEIS3P2A8K0S8 358 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 HOXA2O43364 376 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 ARF4P18085 180 aaPredicted RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 RAB27AP51159 221 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 PPP2R5AQ15172 486 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 PCBP1Q15365 356 aaKnown RBP eCLIP17.53■□□□□ 0.44e-19■■□□□ 12.7
VAT1-202ENST00000420567 CCDC85BQ15834 202 aaPredicted RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 ABI1Q8IZP0 508 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 RAD54LQ92698 747 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 CLP1Q92989 425 aaKnown RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 DRC1Q96MC2 740 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 CASD1Q96PB1 797 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 TRAIPQ9BWF2 469 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 EIF2AQ9BY44 585 aaKnown RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 CCSER1Q9C0I3 900 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 TMEM117Q9H0C3 514 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 C2orf40Q9H1Z8 148 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 BLOC1S4Q9NUP1 217 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 PCDHB2Q9Y5E7 798 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 MTCH2Q9Y6C9 303 aa17.53■□□□□ 0.4
VAT1-202ENST00000420567 MORC2Q9Y6X9 1032 aaPredicted RBP17.53■□□□□ 0.4
VAT1-202ENST00000420567 SFI1A8K8P3 1242 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 SPTLC2O15270 562 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 EOMESO95936 686 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 GUCY2CP25092 1073 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 AXLP30530 894 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 BMPR1AP36894 532 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 PEX3P56589 373 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 NCBP1Q09161 790 aaKnown RBP17.52■□□□□ 0.4
VAT1-202ENST00000420567 GPM6BQ13491 265 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 MCM6Q14566 821 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 SPOUT1Q5T280 376 aaKnown RBP17.52■□□□□ 0.4
VAT1-202ENST00000420567 NOTUMQ6P988 496 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 GPBP1Q86WP2 473 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 CCDC113Q9H0I3 377 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
VAT1-202ENST00000420567 PRMT7Q9NVM4 692 aaPredicted RBP17.52■□□□□ 0.4
VAT1-202ENST00000420567 USP20Q9Y2K6 914 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 RWDD3Q9Y3V2 267 aa17.52■□□□□ 0.4
VAT1-202ENST00000420567 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms