RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 KCNH3Q9ULD8 1083 aa22.81■■□□□ 1.24
HMGXB4-203ENST00000420166 A0A1W2PQ27 194 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 A0A1W2PQ64 194 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 A0A1W2PQD8 194 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 POLR2DO15514 142 aaKnown RBP22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 ERLIN2O94905 339 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 KRT18P05783 430 aaKnown RBP22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 NPTX2P47972 431 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 PEX3P56589 373 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 DMP1Q13316 513 aaPredicted RBP22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 GIT2Q14161 759 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 TOP1MTQ969P6 601 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 KIFC3Q9BVG8 833 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 CHST12Q9NRB3 414 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 RGS18Q9NS28 235 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 AGPAT5Q9NUQ2 364 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 PIN4Q9Y237 131 aaKnown RBP22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 ADGRA3Q8IWK6 1321 aa22.8■■□□□ 1.24
HMGXB4-203ENST00000420166 MYMKA6NI61 221 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 SFI1A8K8P3 1242 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 C9IYK1 514 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 PLS3P13797 630 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 PFKFB1P16118 471 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 ZSCAN20P17040 1043 aaPredicted RBP22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 RABGGTBP53611 331 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 AMHR2Q16671 573 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 SLC24A5Q71RS6 500 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 PYM1Q9BRP8 204 aaKnown RBP22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 HPSEQ9Y251 543 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 LAMA3Q16787 3333 aa22.79■■□□□ 1.24
HMGXB4-203ENST00000420166 A0A1B0GVL5 298 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 CCDC169A6NNP5 214 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 TSPAN1O60635 241 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 TBCAO75347 108 aaKnown RBP22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 FAM13AO94988 1023 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 GJB5O95377 273 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 SARSP49591 514 aaKnown RBP22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 ZNF131P52739 623 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 EFNA5P52803 228 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 FAM117BQ6P1L5 589 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 PPP4R3CPQ6ZMV5 832 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 SPIRE2Q8WWL2 714 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 DDX12PQ92771 950 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 LRCH3Q96II8 777 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 PBX4Q9BYU1 374 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 CCDC113Q9H0I3 377 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 TNMDQ9H2S6 317 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 MAGEF1Q9HAY2 307 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 PRMT7Q9NVM4 692 aaPredicted RBP22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 KBTBD4Q9NVX7 518 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 DACT1Q9NYF0 836 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 LARSQ9P2J5 1176 aaKnown RBP22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 PCDHA11Q9Y5I1 949 aa22.78■■□□□ 1.24
HMGXB4-203ENST00000420166 FAM237AA0A1B0GTK4 181 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 UPP2O95045 317 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 AXLP30530 894 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 HOXA11P31270 313 aaPredicted RBP22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 PBX2P40425 430 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 RAB30Q15771 203 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 FAM187BQ17R55 369 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 DYMQ7RTS9 669 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 NPAS4Q8IUM7 802 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 FSIP1Q8NA03 581 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 MRPS27Q92552 414 aaKnown RBP22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 NTPCRQ9BSD7 190 aaKnown RBP22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 ZBED2Q9BTP6 218 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 FZD8Q9H461 694 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 KMT5AQ9NQR1 393 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 ARHGAP28Q9P2N2 729 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 KCNG1Q9UIX4 513 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 MSRAQ9UJ68 235 aa22.77■■□□□ 1.24
HMGXB4-203ENST00000420166 SLC16A4O15374 487 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 TLL1O43897 1013 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 PRKCBP05771 671 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 DNAJB2P25686 324 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 FXR1P51114 621 aaKnown RBP eCLIP22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 FAM189BP81408 668 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 MAPK6Q16659 721 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 TPRNQ4KMQ1 711 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 TWF2Q6IBS0 349 aaKnown RBP22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 CRIPAKQ8N1N5 446 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 DNAJC19Q96DA6 116 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 PRIMPOLQ96LW4 560 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 TRAIPQ9BWF2 469 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 PARVGQ9HBI0 331 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 YBX2Q9Y2T7 364 aaKnown RBP22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 PHLPP2Q6ZVD8 1323 aa22.76■■□□□ 1.23
HMGXB4-203ENST00000420166 B4GALT5O43286 388 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 STAG3L1P0CL83 205 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 MYOGP15173 224 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 ARF4P18085 180 aaPredicted RBP22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 SMTNP53814 917 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 NCBP1Q09161 790 aaKnown RBP22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 ECHDC2Q86YB7 292 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 MYCT1Q8N699 235 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 STAMQ92783 540 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 RAD9AQ99638 391 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 LRRC27Q9C0I9 530 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 GOLPH3LQ9H4A5 285 aa22.75■■□□□ 1.23
HMGXB4-203ENST00000420166 ZHX3Q9H4I2 956 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms