RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 KCNC3Q14003 757 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 CLUL1Q15846 466 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 UBXN11Q5T124 520 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 SPOUT1Q5T280 376 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 EP400NLQ6ZTU2 488 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 THNSL1Q8IYQ7 743 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 GJD3Q8N144 294 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 SLC39A11Q8N1S5 342 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 PSPC1Q8WXF1 523 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 MRPS27Q92552 414 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 FAM105AQ9NUU6 356 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 PIN4Q9Y237 131 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 A0A087WWV3 80 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 GAS2O43903 313 aaKnown RBP12.32□□□□□ -0.44
SSBP3-206ENST00000420121 MARCH6O60337 910 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 B4GALT3O60512 393 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 EYA4O95677 639 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 TRIM29Q14134 588 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
SSBP3-206ENST00000420121 AGMOQ6ZNB7 445 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 OTUD6AQ7L8S5 288 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 SRGAP1Q7Z6B7 1085 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
SSBP3-206ENST00000420121 TMEM173Q86WV6 379 aaPredicted RBP12.32□□□□□ -0.44
SSBP3-206ENST00000420121 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 ASAP3Q8TDY4 903 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 ZNF558Q96NG5 402 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
SSBP3-206ENST00000420121 BARX2Q9UMQ3 279 aaPredicted RBP12.32□□□□□ -0.44
SSBP3-206ENST00000420121 HIDE1A8MVS5 230 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 PER2O15055 1255 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 MED24O75448 989 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 OFD1O75665 1012 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 MCM7P33993 719 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 ARL2P36404 184 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 RARRES1P49788 294 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 PTENP60484 403 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 SMAD4Q13485 552 aaKnown RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 AMHR2Q16671 573 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 DUSP6Q16828 381 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 LONRF3Q496Y0 759 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 MRPL10Q7Z7H8 261 aaKnown RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 ABI1Q8IZP0 508 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 BCL7CQ8WUZ0 217 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 MTRQ99707 1265 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-206ENST00000420121 TLE6Q9H808 572 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 PRKAG3Q9UGI9 489 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 RAPGEFL1Q9UHV5 662 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
SSBP3-206ENST00000420121 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 HAX1O00165 279 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 ASAP2O43150 1006 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 ATP2B1P20020 1258 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 COL9A1P20849 921 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PPM1AP35813 382 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 NDUFV1P49821 464 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 RAB27AP51159 221 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 BCAR1P56945 870 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 POU5F1BQ06416 359 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 COASYQ13057 564 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 CAPSQ13938 189 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 ADHFE1Q8IWW8 467 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PPP2R3CQ969Q6 453 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 NRDE2Q9H7Z3 1164 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 SH2B1Q9NRF2 756 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-206ENST00000420121 TBC1D13Q9NVG8 400 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 PCDHB2Q9Y5E7 798 aa12.3□□□□□ -0.44
SSBP3-206ENST00000420121 TSPAN1O60635 241 aa12.29□□□□□ -0.44
SSBP3-206ENST00000420121 DGAT1O75907 488 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms