RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 SMRP1Q8NCR6 262 aa16.89■□□□□ 0.29
RARA-205ENST00000420042 TCP11Q8WWU5 503 aa16.89■□□□□ 0.29
RARA-205ENST00000420042 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
RARA-205ENST00000420042 WDR81Q562E7 1941 aa16.89■□□□□ 0.29
RARA-205ENST00000420042 BDP1A6H8Y1 2624 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 ATG2AQ2TAZ0 1938 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 ASAP2O43150 1006 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 DCXO43602 365 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 SEC24BO95487 1268 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 GLP2RO95838 553 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 ATF7P17544 494 aaPredicted RBP16.88■□□□□ 0.29
RARA-205ENST00000420042 SPIRE1Q08AE8 756 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 BMS1Q14692 1282 aaKnown RBP16.88■□□□□ 0.29
RARA-205ENST00000420042 EMC2Q15006 297 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 LONRF3Q496Y0 759 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 GLB1LQ6UWU2 654 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 PGBD4Q96DM1 585 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 MTRQ99707 1265 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 EIF2AK1Q9BQI3 630 aaKnown RBP16.88■□□□□ 0.29
RARA-205ENST00000420042 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 C11orf16Q9NQ32 467 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 FAM105AQ9NUU6 356 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
RARA-205ENST00000420042 NEMFO60524 1076 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 SLITRK3O94933 977 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 TXKP42681 527 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 BCAR1P56945 870 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
RARA-205ENST00000420042 SLC39A11Q8N1S5 342 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 LPPQ93052 612 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 TTC12Q9H892 705 aaPredicted RBP16.87■□□□□ 0.29
RARA-205ENST00000420042 INPP5FQ9Y2H2 1132 aa16.87■□□□□ 0.29
RARA-205ENST00000420042 PLXNA4Q9HCM2 1894 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 PRR33A8MZF0 331 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 ZBTB39O15060 712 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 ZNF623O75123 536 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.29
RARA-205ENST00000420042 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
RARA-205ENST00000420042 CA8P35219 290 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 RNASELQ05823 741 aaKnown RBP16.86■□□□□ 0.29
RARA-205ENST00000420042 SMC1AQ14683 1233 aaKnown RBP16.86■□□□□ 0.29
RARA-205ENST00000420042 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 FERMT3Q86UX7 667 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 RNF149Q8NC42 400 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 TMEM169Q96HH4 297 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
RARA-205ENST00000420042 AGPAT5Q9NUQ2 364 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
RARA-205ENST00000420042 PCDHB2Q9Y5E7 798 aa16.86■□□□□ 0.29
RARA-205ENST00000420042 HIDE1A8MVS5 230 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 LYPLA2O95372 231 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 TECP42680 631 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 RBM10P98175 930 aaKnown RBP16.85■□□□□ 0.29
RARA-205ENST00000420042 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
RARA-205ENST00000420042 MXD4Q14582 209 aaPredicted RBP16.85■□□□□ 0.29
RARA-205ENST00000420042 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 VN1R2Q8NFZ6 395 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 ANKEF1Q9NU02 776 aa16.85■□□□□ 0.29
RARA-205ENST00000420042 OFD1O75665 1012 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 DGAT1O75907 488 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 ERLIN2O94905 339 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 TFDP1Q14186 410 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 ANKRD54Q6NXT1 300 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 TMEM184AQ6ZMB5 413 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 RNF135Q8IUD6 432 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 MRPL43Q8N983 215 aaKnown RBP16.84■□□□□ 0.29
RARA-205ENST00000420042 TMEM87AQ8NBN3 555 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 URGCPQ8TCY9 931 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 C8orf76Q96K31 380 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 PHF7Q9BWX1 381 aaPredicted RBP16.84■□□□□ 0.29
RARA-205ENST00000420042 MINDY3Q9H8M7 445 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
RARA-205ENST00000420042 C2orf71A6NGG8 1288 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 MEIS3P2A8K0S8 358 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 WNT7AO00755 349 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 CXCL14O95715 111 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 MCM7P33993 719 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 PCBP1Q15365 356 aaKnown RBP eCLIP16.83■□□□□ 0.28
RARA-205ENST00000420042 VPS52Q8N1B4 723 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 FAM122AQ96E09 287 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 MTMR9Q96QG7 549 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 LLPHQ9BRT6 129 aaKnown RBP16.83■□□□□ 0.28
RARA-205ENST00000420042 GBP3Q9H0R5 595 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 XPNPEP1Q9NQW7 623 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 MUTYHQ9UIF7 546 aa16.83■□□□□ 0.28
RARA-205ENST00000420042 INO80B-WBP1J3KQ70 363 aa16.82■□□□□ 0.28
RARA-205ENST00000420042 GALTP07902 379 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms