RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 MTF2Q9Y483 593 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 MAFBQ9Y5Q3 323 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 MEIS1O00470 390 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 BACH1O14867 736 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 OFD1O75665 1012 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 RFPL2O75678 378 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 ADH1AP07327 375 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 TDGF1P13385 188 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 GPC3P51654 580 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 CEP55Q53EZ4 464 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 NOMO2Q5JPE7 1267 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 ANKRD45Q5TZF3 282 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 GLB1LQ6UWU2 654 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 METTL13Q8N6R0 699 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 DDX1Q92499 740 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 HERC2P3Q9BVR0 1158 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 RXFP1Q9HBX9 757 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 CHST12Q9NRB3 414 aa11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-205ENST00000419442 FAM170BA6NMN3 283 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 TEX28O15482 410 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZNF623O75123 536 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 EFEMP2O95967 443 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 GLUD1P00367 558 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 SOD2P04179 222 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 PROS1P07225 676 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 RPS9P46781 194 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 SPEM2Q0P670 501 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 UBXN2BQ14CS0 331 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 SLC44A4Q53GD3 710 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 LAIR1Q6GTX8 287 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 TEX2Q8IWB9 1127 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 FGF14Q92915 247 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 MAP7D2Q96T17 732 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 TMEM175Q9BSA9 504 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 AKT3Q9Y243 479 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 GREB1Q4ZG55 1949 aa11.91□□□□□ -0.5
RAPGEF1-205ENST00000419442 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 ERICH2A1L162 156 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 MEIS3P2A8K0S8 358 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 SSBP05455 408 aaKnown RBP eCLIP11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 RETP07949 1114 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 SKIP12755 728 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 FGFR4P22455 802 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 FZD5Q13467 585 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZBTB41Q5SVQ8 909 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 SWSAP1Q6NVH7 229 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 MIS18BP1Q6P0N0 1132 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 TSSK4Q6SA08 328 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 GET4Q7L5D6 327 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZNF280BQ86YH2 543 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 LPPQ93052 612 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
RAPGEF1-205ENST00000419442 NOTCH4Q99466 2003 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 DDAH1O94760 285 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 DDHD2O94830 711 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 URODP06132 367 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 TMOD1P28289 359 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 KIF5BP33176 963 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 RNASELQ05823 741 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 TRDNQ13061 729 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 CSRP2Q16527 193 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 N4BP2L1Q5TBK1 243 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 PARM1Q6UWI2 310 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 CELF5Q8N6W0 485 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 IGDCC4Q8TDY8 1250 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 NELL2Q99435 816 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 SEMA4GQ9NTN9 838 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 FAM105AQ9NUU6 356 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 MARCH5Q9NX47 278 aa11.89□□□□□ -0.51
RAPGEF1-205ENST00000419442 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms