RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 GCOM2Q9BZD3 368 aaPredicted RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 YBX2Q9Y2T7 364 aaKnown RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 ZDHHC9Q9Y397 364 aa11.69□□□□□ -0.54
RFC1-203ENST00000418436 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
RFC1-203ENST00000418436 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 E9PMD0 336 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 EYA4O95677 639 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 BRD1O95696 1058 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 CYP11B2P19099 503 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 DSC3Q14574 896 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 MXD4Q14582 209 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 TMEM119Q4V9L6 283 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 KCNK18Q7Z418 384 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 TMCO2Q7Z6W1 182 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 CABP7Q86V35 215 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 LINC00301Q8NCQ3 95 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 TIFAQ96CG3 184 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 ZNF396Q96N95 335 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 INO80BQ9C086 356 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 NT5C3AQ9H0P0 336 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 TTYH1Q9H313 450 aaPredicted RBP11.68□□□□□ -0.54
RFC1-203ENST00000418436 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 DNM3Q9UQ16 869 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 COL4A6Q14031 1691 aa11.68□□□□□ -0.54
RFC1-203ENST00000418436 MGEA5O60502 916 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 USO1O60763 962 aaKnown RBP11.67□□□□□ -0.54
RFC1-203ENST00000418436 MYOGP15173 224 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 GLRA2P23416 452 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
RFC1-203ENST00000418436 UBA7P41226 1012 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 FAM189BP81408 668 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
RFC1-203ENST00000418436 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 MYOCDQ8IZQ8 938 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
RFC1-203ENST00000418436 NLRP4Q96MN2 994 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 SCLT1Q96NL6 688 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 RAD9AQ99638 391 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 CCSER1Q9C0I3 900 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
RFC1-203ENST00000418436 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
RFC1-203ENST00000418436 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 C9IYK1 514 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 GPR37O15354 613 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 TLL1O43897 1013 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 RNF40O75150 1001 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 PPP6R2O75170 966 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 CSDE1O75534 798 aaKnown RBP11.66□□□□□ -0.54
RFC1-203ENST00000418436 YEATS4O95619 227 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 PTENP60484 403 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 CAPSQ13938 189 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 USP49Q70CQ1 688 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 Q7L0L9 218 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 SYT2Q8N9I0 419 aaPredicted RBP11.66□□□□□ -0.54
RFC1-203ENST00000418436 RNF149Q8NC42 400 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 LRRC15Q8TF66 581 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 CLIC6Q96NY7 704 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 ADAM2Q99965 735 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
RFC1-203ENST00000418436 ZNF576Q9H609 170 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 MINDY3Q9H8M7 445 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
RFC1-203ENST00000418436 GPRC5CQ9NQ84 441 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 INSL6Q9Y581 213 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 TCHHQ07283 1943 aa11.66□□□□□ -0.54
RFC1-203ENST00000418436 FNDC1Q4ZHG4 1894 aaPredicted RBP11.66□□□□□ -0.54
RFC1-203ENST00000418436 MYH11P35749 1972 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 LCHNA4D1U4 455 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 SPTLC2O15270 562 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 ARHGEF15O94989 841 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 UPP2O95045 317 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 CA3P07451 260 aa11.65□□□□□ -0.54
RFC1-203ENST00000418436 FGFR4P22455 802 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms