RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ARHGAP27Q6ZUM4 889 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MREGQ8N565 214 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 SLC30A5Q8TAD4 765 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GPR88Q9GZN0 384 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 OLFML3Q9NRN5 406 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 FOXO6A8MYZ6 492 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 H0YGN5 161 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 SLC16A4O15374 487 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MEFVO15553 781 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-202ENST00000418310 SGPL1O95470 568 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GAP43P17677 238 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 DAB2IPQ5VWQ8 1189 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 FOXR2Q6PJQ5 311 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MOXD1Q6UVY6 613 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MLXIPLQ9NP71 852 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 DDX3YO15523 660 aaKnown RBP12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GJC1P36383 396 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 ICE2Q659A1 982 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MIER3Q7Z3K6 550 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 FIZ1Q96SL8 496 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GGT7Q9UJ14 662 aa12.86□□□□□ -0.35
LIMK1-202ENST00000418310 GOLGA6L10A0A0M3HER8 536 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC188H7C350 402 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CYP26A1O43174 497 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 SPOPO43791 374 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-202ENST00000418310 HNRNPH1P31943 449 aaKnown RBP12.85□□□□□ -0.35
LIMK1-202ENST00000418310 NPEPPSP55786 919 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 PEX3P56589 373 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 DAW1Q8N136 415 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 NFIBO00712 420 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CYP3A4P08684 503 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CIITAP33076 1130 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 PPP2R2AP63151 447 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 BMT2Q1RMZ1 405 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 LLGL2Q6P1M3 1020 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 RAPGEF5Q92565 580 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
LIMK1-202ENST00000418310 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 AGPAT1Q99943 283 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 TEKT3Q9BXF9 490 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
LIMK1-202ENST00000418310 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
LIMK1-202ENST00000418310 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ALAS1P13196 640 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 STRIP1Q5VSL9 837 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 KCNV1Q6PIU1 500 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC105Q8IYK2 499 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 TAF1LQ8IZX4 1826 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 C21orf2O43822 256 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CTNND1O60716 968 aaKnown RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ZBTB48P10074 688 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 COMTP21964 271 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 PDE6BP35913 854 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 SLFN11Q7Z7L1 901 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 SLC47A2Q86VL8 602 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 GMNCA6NCL1 334 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ANKRD63C9JTQ0 380 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 DLATP10515 647 aaKnown RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ITGB5P18084 799 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 VAMP7P51809 220 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 IFI35P80217 286 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-202ENST00000418310 SLC29A2Q14542 456 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 FAM102BQ5T8I3 360 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms