RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 LMNAP02545 664 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RFX1P22670 979 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CLCN4P51793 760 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FGD1P98174 961 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TARBP2Q15633 366 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PTPN14Q15678 1187 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LONRF3Q496Y0 759 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 XKR3Q5GH77 459 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF410Q86VK4 478 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 URGCPQ8TCY9 931 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 STAMQ92783 540 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LPPQ93052 612 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PGBD4Q96DM1 585 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KLHL5Q96PQ7 755 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GBP3Q9H0R5 595 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 MRPL17Q9NRX2 175 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FAM105AQ9NUU6 356 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NAP1L2Q9ULW6 460 aaPredicted RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PIN4Q9Y237 131 aaKnown RBP8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF292O60281 2723 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CACNA1AO00555 2505 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 A0A087WZ62 844 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 MSH4O15457 936 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CHMP2AO43633 222 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SSBP05455 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CNPP09543 421 aaKnown RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CDC27P30260 824 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GBP2P32456 591 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SLC11A1P49279 550 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 USP11P51784 963 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 AKAP17AQ02040 695 aaKnown RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DRP2Q13474 957 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 MTERF2Q49AM1 385 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CATSPER4Q7RTX7 472 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF280BQ86YH2 543 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RHPN2Q8IUC4 686 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CMASQ8NFW8 434 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 BCL7CQ8WUZ0 217 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SLC5A5Q92911 643 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LENG9Q96B70 501 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CCDC136Q96JN2 1154 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TCEANC2Q96MN5 208 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FAM193BQ96PV7 902 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 JPH2Q9BR39 696 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FDXACB1Q9BRP7 624 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TEKT3Q9BXF9 490 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SUCLA2Q9P2R7 463 aaPredicted RBP8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DNAJB4Q9UDY4 337 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SSX2IPQ9Y2D8 614 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FAN1Q9Y2M0 1017 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PCDHB2Q9Y5E7 798 aa8.84□□□□□ -0.99
HLA-DPA1-241ENST00000417724 IGKV6-21A0A0C4DH24 114 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 CCDC195A0A1B0GUA6 201 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 MEIS3P2A8K0S8 358 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 ADAMTS3O15072 1205 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 LILRB3O75022 631 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 ADH1AP07327 375 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 CFHP08603 1231 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 KRT32Q14532 448 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 UGCGQ16739 394 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 MIER3Q7Z3K6 550 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 MRPL10Q7Z7H8 261 aaKnown RBP8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 SLC44A3Q8N4M1 653 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 TMEM175Q9BSA9 504 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 VN1R3Q9BXE9 311 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 RHOBTB2Q9BYZ6 727 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 UNC45AQ9H3U1 944 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 WDR6Q9NNW5 1121 aaKnown RBP8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
HLA-DPA1-241ENST00000417724 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 MTCL1Q9Y4B5 1905 aaKnown RBP8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 KRBA1A5PL33 1030 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 C2CD2LO14523 706 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 NRP1O14786 923 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 NARSO43776 548 aaKnown RBP8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 N4BP1O75113 896 aaKnown RBP8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 MAFO75444 373 aaPredicted RBP8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 PSMD10O75832 226 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 DDHD2O94830 711 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 SOD2P04179 222 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 URODP06132 367 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 SRFP11831 508 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 AK2P54819 239 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 PUM1Q14671 1186 aaKnown RBP eCLIP8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 PHLDB3Q6NSJ2 640 aa8.82□□□□□ -1
HLA-DPA1-241ENST00000417724 ZC3H14Q6PJT7 736 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms