RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ERP27Q96DN0 273 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM87BQ96K49 555 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 PUS3Q9BZE2 481 aaKnown RBP6.88□□□□□ -1.31
CCNT1-202ENST00000417344 FAM207AQ9NSI2 230 aaPredicted RBP6.88□□□□□ -1.31
CCNT1-202ENST00000417344 DDX25Q9UHL0 483 aaKnown RBP6.88□□□□□ -1.31
CCNT1-202ENST00000417344 HAO1Q9UJM8 370 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 ITGB1BP2Q9UKP3 347 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 DENND2AQ9ULE3 1009 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 TBC1D30Q9Y2I9 924 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 NOC2LQ9Y3T9 749 aaKnown RBP6.88□□□□□ -1.31
CCNT1-202ENST00000417344 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
CCNT1-202ENST00000417344 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 SIGLEC1Q9BZZ2 1709 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 PNPLA7Q6ZV29 1317 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 PASKQ96RG2 1323 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM247A6NEH6 219 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 KCNQ3O43525 872 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 DEXIO95424 95 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 EYA4O95677 639 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 DDX58O95786 925 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 IGKV5-2P06315 115 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 PABPC4LP0CB38 370 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 MYL6BP14649 208 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 VAV1P15498 845 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 NAT1P18440 290 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 MARK3P27448 753 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 HOXD12P35452 270 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 GPSM2P81274 684 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 GSTM4Q03013 218 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 SLC34A1Q06495 639 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 ADCY1Q08828 1119 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 RCN1Q15293 331 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 KCTD19Q17RG1 926 aaPredicted RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 CGB2Q6NT52 195 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 BTNL9Q6UXG8 535 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 FAM47EQ6ZV65 393 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 MARK2Q7KZI7 788 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM110Q86TL2 294 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 SGMS1Q86VZ5 419 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 MAP7D3Q8IWC1 876 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 SNRNP27Q8WVK2 155 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 GRAMD1AQ96CP6 724 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 NEUROD6Q96NK8 337 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 ZNF184Q99676 751 aaPredicted RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 ARPC5LQ9BPX5 153 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 INIPQ9NRY2 104 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 DDX43Q9NXZ2 648 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 CNOT7Q9UIV1 285 aaKnown RBP6.87□□□□□ -1.31
CCNT1-202ENST00000417344 SLC12A7Q9Y666 1083 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM131LA2VDJ0 1609 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 KIDINS220Q9ULH0 1771 aa6.87□□□□□ -1.31
CCNT1-202ENST00000417344 BICDL2A1A5D9 508 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TRAFD1O14545 582 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ATP9BO43861 1147 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 IFIT1P09914 478 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 FBXO45P0C2W1 286 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SERPINB3P29508 390 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 IGHMBP2P38935 993 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SLCO1A2P46721 670 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 USP11P51784 963 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 POLGP54098 1239 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ADARP55265 1226 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SLC29A2Q14542 456 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 R3HDM1Q15032 1099 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 WDR72Q3MJ13 1102 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SLC9C1Q4G0N8 1177 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TDRD12Q587J7 1177 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 HGSNATQ68CP4 663 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 HS2ST1Q7LGA3 356 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ST13P4Q8IZP2 240 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 RIBC1Q8N443 379 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 GIMAP8Q8ND71 665 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 IGDCC4Q8TDY8 1250 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 EPS8L3Q8TE67 593 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CKAP2Q8WWK9 683 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 BAP1Q92560 729 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ANKS1AQ92625 1134 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 SLC7A6OSQ96CW6 309 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 EEF2KMTQ96G04 330 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ABHD8Q96I13 439 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 MPP4Q96JB8 637 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TMEM109Q9BVC6 243 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CELF4Q9BZC1 486 aaKnown RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 KIAA1683Q9H0B3 1180 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-202ENST00000417344 CUEDC2Q9H467 287 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 LY9Q9HBG7 655 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
CCNT1-202ENST00000417344 METTL5Q9NRN9 209 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms