RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 DEF6Q9H4E7 631 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■■■ 94.7
SMPD4P1-201ENST00000416717 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 EXOC7Q9UPT5 735 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 FHOD1Q9Y613 1164 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 MYH10P35580 1976 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 STRNO43815 780 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 GLRA2P23416 452 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 FMO5P49326 533 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 FAM110CQ1W6H9 321 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 CBWD2Q8IUF1 395 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 LRRC71Q8N4P6 559 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 MYRIPQ8NFW9 859 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 POMGNT1Q8WZA1 660 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 CEP89Q96ST8 783 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 C17orf75Q9HAS0 396 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 AJAP1Q9UKB5 411 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 GUCA1BQ9UMX6 200 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 TRPC6Q9Y210 931 aa11.65□□□□□ -0.55
SMPD4P1-201ENST00000416717 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 ADRB2P07550 413 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 PNMA6AP0CW24 399 aaPredicted RBP11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 UCHL3P15374 230 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 VAMP7P51809 220 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 PLCB4Q15147 1175 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 KLHDC7AQ5VTJ3 777 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 KIAA1328Q86T90 577 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 SAPCD2Q86UD0 394 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 DEPTORQ8TB45 409 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 CCDC127Q96BQ5 260 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
SMPD4P1-201ENST00000416717 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 AKR1B10O60218 316 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 TLR2O60603 784 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 LRRN2O75325 713 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 GCLMP48507 274 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 IGBP1P78318 339 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ARHGAP1Q07960 439 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 GRB14Q14449 540 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZNF569Q5MCW4 686 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 DPY19L2P1Q6NXN4 242 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 SPAG5Q96R06 1193 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 SIX2Q9NPC8 291 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 DIS3Q9Y2L1 958 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZNF263O14978 683 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 LGR5O75473 907 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 URI1O94763 535 aaPredicted RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 IPO7O95373 1038 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 GJB1P08034 283 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZNF286BP0CG31 522 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 SRGAP2CP0DJJ0 459 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 CASQ1P31415 396 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 HNRNPH3P31942 346 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ARL2P36404 184 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ARHGAP25P42331 645 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 LIG4P49917 911 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 KIF11P52732 1056 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 MYL7Q01449 175 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 PPP3CAQ08209 521 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 SNRNP35Q16560 246 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 PRAMEF19Q5SWL8 479 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ABRAQ8N0Z2 381 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 AFG1LQ8WV93 481 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 PRPF31Q8WWY3 499 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 FAM167AQ96KS9 214 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 RNPEPQ9H4A4 650 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 ARHGAP28Q9P2N2 729 aa11.63□□□□□ -0.55
SMPD4P1-201ENST00000416717 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZBTB42B2RXF5 422 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 K7ERI5 159 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 KIF5CO60282 957 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAPK4P31152 587 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 RFC5P40937 340 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 RTP1P59025 263 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 GFPT1Q06210 699 aaPredicted RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 STRN3Q13033 797 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CAPSQ13938 189 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MYBPC2Q14324 1141 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 PPP2R5AQ15172 486 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms