RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EIF2AK1Q9BQI3 630 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 TTC12Q9H892 705 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 NGRNQ9NPE2 291 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 FAM105AQ9NUU6 356 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 CLEC1BQ9P126 229 aa19.64■□□□□ 0.73
PDLIM2-208ENST00000416159 CARNS1A5YM72 827 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 PER2O15055 1255 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 NEMFO60524 1076 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 LYPLA2O95372 231 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 SRGAP2CP0DJJ0 459 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 ALADP13716 330 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 TXKP42681 527 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 LAMTOR4Q0VGL1 99 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 EMC2Q15006 297 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 DUSP6Q16828 381 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 MTRQ99707 1265 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 HSD17B14Q9BPX1 270 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 LRFN3Q9BTN0 628 aa19.63■□□□□ 0.73
PDLIM2-208ENST00000416159 ZBTB39O15060 712 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 ALDH7A1P49419 539 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 PLPP4Q5VZY2 271 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 FERMT3Q86UX7 667 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 CCDC83Q8IWF9 413 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 SLC39A11Q8N1S5 342 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 PGBD4Q96DM1 585 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 ZSCAN31Q96LW9 406 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 MTMR9Q96QG7 549 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 TCF25Q9BQ70 676 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 LLPHQ9BRT6 129 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 ENTPD7Q9NQZ7 604 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 BMP2KQ9NSY1 1161 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 ANKEF1Q9NU02 776 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 AGPAT5Q9NUQ2 364 aa19.62■□□□□ 0.73
PDLIM2-208ENST00000416159 GLP2RO95838 553 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 PBX3P40426 434 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 MXD4Q14582 209 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 GLB1LQ6UWU2 654 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 TMC7Q7Z402 723 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 RNF149Q8NC42 400 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 SMRP1Q8NCR6 262 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 LPPQ93052 612 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 C8orf76Q96K31 380 aa19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 BARX2Q9UMQ3 279 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-208ENST00000416159 WNT7AO00755 349 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 DGAT1O75907 488 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 SRGAP2BP0DMP2 458 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 XRCC6P12956 609 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 BCAR1P56945 870 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 BMS1Q14692 1282 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 PCBP1Q15365 356 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 NOMO2Q5JPE7 1267 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 MINDY3Q9H8M7 445 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 XPNPEP1Q9NQW7 623 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 PCDHB2Q9Y5E7 798 aa19.6■□□□□ 0.73
PDLIM2-208ENST00000416159 DCXO43602 365 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 OFD1O75665 1012 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 ATP2B1P20020 1258 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 HMGN5P82970 282 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 GUCY1B3Q02153 619 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 POU5F1BQ06416 359 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 TFDP1Q14186 410 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 LONRF3Q496Y0 759 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 TMEM184AQ6ZMB5 413 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 MRPL10Q7Z7H8 261 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 TMEM169Q96HH4 297 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 TMEM60Q9H2L4 133 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 FOXP1Q9H334 677 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 C11orf16Q9NQ32 467 aa19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 SH2B1Q9NRF2 756 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-208ENST00000416159 ARID2Q68CP9 1835 aa19.58■□□□□ 0.73
PDLIM2-208ENST00000416159 HIDE1A8MVS5 230 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 NT5C1B-RDH14C9J2C7 533 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 ERLIN2O94905 339 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 AXLP30530 894 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 HOXA11P31270 313 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 MCM7P33993 719 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 PTENP60484 403 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 RNASELQ05823 741 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 KCNC3Q14003 757 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 SMC1AQ14683 1233 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 IFNLR1Q8IU57 520 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 CNNM3Q8NE01 707 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 VN1R2Q8NFZ6 395 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 NRDE2Q9H7Z3 1164 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 TBC1D13Q9NVG8 400 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 RAPGEFL1Q9UHV5 662 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 INPP5FQ9Y2H2 1132 aa19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 USP15Q9Y4E8 981 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-208ENST00000416159 CNTNAP2Q9UHC6 1331 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 MEIS3P2A8K0S8 358 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 ZC3H11AO75152 810 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 RARRES1P49788 294 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 AGMOQ6ZNB7 445 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 URGCPQ8TCY9 931 aa19.57■□□□□ 0.72
PDLIM2-208ENST00000416159 TUFT1Q9NNX1 390 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms