RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 MATR3P43243 847 aaKnown RBP eCLIP9.23□□□□□ -0.93
RBM39-208ENST00000416108 CASP5P51878 434 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GTF2BQ00403 316 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 HSP90AA2PQ14568 343 aaPredicted RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 MAPK6Q16659 721 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 MARCH8Q5T0T0 291 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 SPATA1Q5VX52 437 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 EPM2AIP1Q7L775 607 aaPredicted RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 SRGAP1Q7Z6B7 1085 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 LUZP1Q86V48 1076 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GAS2L3Q86XJ1 694 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 KSR1Q8IVT5 923 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 LINC01465Q8N7H1 131 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 TMEM161BQ8NDZ6 487 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GLIS3Q8NEA6 775 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 NOC3LQ8WTT2 800 aaKnown RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 DNAJB3Q8WWF6 145 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 ANP32BQ92688 251 aaKnown RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 ZBTB10Q96DT7 871 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 PPP1R16BQ96T49 567 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 NTPCRQ9BSD7 190 aaKnown RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 INO80BQ9C086 356 aaPredicted RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 CGNQ9P2M7 1197 aaKnown RBP9.23□□□□□ -0.93
RBM39-208ENST00000416108 TBX20Q9UMR3 447 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 GINS2Q9Y248 185 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 NFE2L3Q9Y4A8 694 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 TRIP11Q15643 1979 aa9.23□□□□□ -0.93
RBM39-208ENST00000416108 ANK1P16157 1881 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 RALGAPA2Q2PPJ7 1873 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 A0A087WZ62 844 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 INO80B-WBP1J3KQ70 363 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 ARVCFO00192 962 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 PDXKO00764 312 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 HNRNPDLO14979 420 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 CETN3O15182 167 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 PPP1R37O75864 691 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 ERLIN2O94905 339 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 PRKCBP05771 671 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 TPM2P07951 284 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 CDK11BP21127 795 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 HOXC8P31273 242 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 GJA8P48165 433 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 LIG4P49917 911 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 GPC3P51654 580 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 NLRP11P59045 1033 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 SNRPFP62306 86 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 ADAM17P78536 824 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 ZNF200P98182 395 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 PLCB2Q00722 1185 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 SPAG1Q07617 926 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 NCBP1Q09161 790 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 TMEM62Q0P6H9 643 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 PTK7Q13308 1070 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 MKRN4PQ13434 485 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 UVSSAQ2YD98 709 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 EDRF1Q3B7T1 1238 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 CDCA2Q69YH5 1023 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 CENPPQ6IPU0 288 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 ARMCX5Q6P1M9 558 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 RUFY4Q6ZNE9 571 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 CREBRFQ8IUR6 639 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 MAP4K3Q8IVH8 894 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 DHX40Q8IX18 779 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 KIAA0319LQ8IZA0 1049 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 ZNF668Q96K58 619 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 FDXACB1Q9BRP7 624 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 MRPL4Q9BYD3 311 aaKnown RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 NFKBIZQ9BYH8 718 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 FGFBP2Q9BYJ0 223 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 SENP6Q9GZR1 1112 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 PRMT7Q9NVM4 692 aaPredicted RBP9.22□□□□□ -0.93
RBM39-208ENST00000416108 ARHGAP28Q9P2N2 729 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 TRPV2Q9Y5S1 764 aa9.22□□□□□ -0.93
RBM39-208ENST00000416108 CAND2O75155 1236 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 NR3C1P04150 777 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 SFPQP23246 707 aaKnown RBP eCLIP9.21□□□□□ -0.94
RBM39-208ENST00000416108 MRE11P49959 708 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 PTENP60484 403 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 MRPS6P82932 125 aaKnown RBP9.21□□□□□ -0.94
RBM39-208ENST00000416108 FKBP3Q00688 224 aaKnown RBP9.21□□□□□ -0.94
RBM39-208ENST00000416108 PRPF4BQ13523 1007 aaKnown RBP9.21□□□□□ -0.94
RBM39-208ENST00000416108 IQCB1Q15051 598 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 KIZQ2M2Z5 673 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 CCDC40Q4G0X9 1142 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 TTI2Q6NXR4 508 aa9.21□□□□□ -0.94
RBM39-208ENST00000416108 FOXR2Q6PJQ5 311 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms