RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PHKA2P46019 1235 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 ALDH7A1P49419 539 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 NPEPPSP55786 919 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 NCBP1Q09161 790 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 PCBP1Q15365 356 aaKnown RBP eCLIP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 SMAD2Q15796 467 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 TMEM31Q5JXX7 168 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 GLB1LQ6UWU2 654 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 RBM23Q86U06 439 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 PGBD4Q96DM1 585 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 DYDC2Q96IM9 177 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 LLPHQ9BRT6 129 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 KIAA1671Q9BY89 1806 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 BTBD18B2RXH4 712 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 GOLGA6L22H0YM25 854 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 CSDE1O75534 798 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 MXD4Q14582 209 aaPredicted RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 EMC2Q15006 297 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 CLUL1Q15846 466 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 EARS2Q5JPH6 523 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 ZNF598Q86UK7 904 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 HELQQ8TDG4 1101 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 TTC12Q9H892 705 aaPredicted RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 RGL1Q9NZL6 768 aa22.8■■□□□ 1.24
PTPRU-203ENST00000415600 PI4K2BG5E9Z4 385 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 JAK2O60674 1132 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 TBX10O75333 385 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 SYT1P21579 422 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 CYP4A11Q02928 519 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 CTTNQ14247 550 aaKnown RBP22.79■■□□□ 1.24
PTPRU-203ENST00000415600 CLLU1OSQ5K130 101 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 PRPF31Q8WWY3 499 aaKnown RBP22.79■■□□□ 1.24
PTPRU-203ENST00000415600 MTRQ99707 1265 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
PTPRU-203ENST00000415600 EPHX3Q9H6B9 360 aa22.79■■□□□ 1.24
PTPRU-203ENST00000415600 MBTPS2O43462 519 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 STX6O43752 255 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 SRGAP2CP0DJJ0 459 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 GTF2F1P35269 517 aaKnown RBP eCLIP22.78■■□□□ 1.24
PTPRU-203ENST00000415600 HMGN5P82970 282 aaKnown RBP22.78■■□□□ 1.24
PTPRU-203ENST00000415600 SPIRE1Q08AE8 756 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 LAMTOR4Q0VGL1 99 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
PTPRU-203ENST00000415600 TFDP1Q14186 410 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 ADGRD2Q7Z7M1 963 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 KSR1Q8IVT5 923 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 TMEM143Q96AN5 459 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 C8orf76Q96K31 380 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 TCF25Q9BQ70 676 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 FAM105AQ9NUU6 356 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 RNF19AQ9NV58 838 aa22.78■■□□□ 1.24
PTPRU-203ENST00000415600 FAM205CA6NFA0 338 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 LINC01565O15544 149 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 DTNBO60941 627 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 ZNF623O75123 536 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 LYPLA2O95372 231 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 TXKP42681 527 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 FOSBP53539 338 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 ZP2Q05996 745 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 DLX2Q07687 328 aaPredicted RBP22.77■■□□□ 1.24
PTPRU-203ENST00000415600 COASYQ13057 564 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 LRRC55Q6ZSA7 311 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 TMEM169Q96HH4 297 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 IFT122Q9HBG6 1241 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 ANKEF1Q9NU02 776 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 AGPAT5Q9NUQ2 364 aa22.77■■□□□ 1.24
PTPRU-203ENST00000415600 DGAT1O75907 488 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 ERLIN2O94905 339 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 SLITRK3O94933 977 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 EYA4O95677 639 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 RNASELQ05823 741 aaKnown RBP22.76■■□□□ 1.23
PTPRU-203ENST00000415600 ORC2Q13416 577 aaPredicted RBP22.76■■□□□ 1.23
PTPRU-203ENST00000415600 TMC7Q7Z402 723 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 FERMT3Q86UX7 667 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 FAM184AQ8NB25 1140 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 TMEM87AQ8NBN3 555 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 URGCPQ8TCY9 931 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 WRAP73Q9P2S5 460 aaPredicted RBP22.76■■□□□ 1.23
PTPRU-203ENST00000415600 HCSTQ9UBK5 93 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 STK39Q9UEW8 545 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 FSCN2O14926 492 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 GPR37L1O60883 481 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 ZSCAN22P10073 491 aaPredicted RBP22.76■■□□□ 1.23
PTPRU-203ENST00000415600 PDCP20941 246 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 ERVFC1P60507 584 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 DUSP6Q16828 381 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 PLPP4Q5VZY2 271 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 RNF149Q8NC42 400 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 CNNM3Q8NE01 707 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 ERMNQ8TAM6 284 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 MSLNLQ96KJ4 702 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 HSD17B14Q9BPX1 270 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 CD320Q9NPF0 282 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 HCN4Q9Y3Q4 1203 aa22.76■■□□□ 1.23
PTPRU-203ENST00000415600 XRCC6P12956 609 aaKnown RBP eCLIP22.75■■□□□ 1.23
PTPRU-203ENST00000415600 ATF7P17544 494 aaPredicted RBP22.75■■□□□ 1.23
PTPRU-203ENST00000415600 SMC1AQ14683 1233 aaKnown RBP22.75■■□□□ 1.23
PTPRU-203ENST00000415600 NOMO2Q5JPE7 1267 aa22.75■■□□□ 1.23
PTPRU-203ENST00000415600 SMRP1Q8NCR6 262 aa22.75■■□□□ 1.23
PTPRU-203ENST00000415600 UBN1Q9NPG3 1134 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms