RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 MRFAP1L1Q96HT8 127 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 SUCLG2Q96I99 432 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 GUCD1Q96NT3 240 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
TRA2B-204ENST00000414862 MCMBPQ9BTE3 642 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
TRA2B-204ENST00000414862 STXBP3O00186 592 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
TRA2B-204ENST00000414862 ZGLP1P0C6A0 271 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 SLC5A1P13866 664 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 SSRP1Q08945 709 aaKnown RBP9.52□□□□□ -0.89
TRA2B-204ENST00000414862 LRRC24Q50LG9 513 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 DNAH12Q6ZR08 3092 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.89
TRA2B-204ENST00000414862 VGLL2Q8N8G2 317 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 BTN2A2Q8WVV5 523 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 SOCS4Q8WXH5 440 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 DNAJC7Q99615 494 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 RC3H2Q9HBD1 1191 aaKnown RBP9.52□□□□□ -0.89
TRA2B-204ENST00000414862 PFASO15067 1338 aa9.52□□□□□ -0.89
TRA2B-204ENST00000414862 MGAMO43451 1857 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 DDX60LQ5H9U9 1706 aaKnown RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 ALPK3Q96L96 1907 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 AURKAO14965 403 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 ENTPD3O75355 529 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 PRDX5P30044 214 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 RGS3P49796 1198 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 HK2P52789 917 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 MAFAQ8NHW3 353 aaPredicted RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 PIF1Q9H611 641 aa9.51□□□□□ -0.89
TRA2B-204ENST00000414862 BICC1Q9H694 974 aaKnown RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 CWC22Q9HCG8 908 aaKnown RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 GNL3LQ9NVN8 582 aaKnown RBP9.51□□□□□ -0.89
TRA2B-204ENST00000414862 C2orf71A6NGG8 1288 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 ZKSCAN1P17029 563 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-204ENST00000414862 DUSP4Q13115 394 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 HSP90AA2PQ14568 343 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-204ENST00000414862 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-204ENST00000414862 DZIP1Q86YF9 867 aaKnown RBP9.5□□□□□ -0.89
TRA2B-204ENST00000414862 LINC01599Q8WXQ3 324 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 TRIB2Q92519 343 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 LPIN2Q92539 896 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 G6PC3Q9BUM1 346 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 IDI2Q9BXS1 227 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 CYP26B1Q9NR63 512 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 EBF1Q9UH73 591 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 BACE2Q9Y5Z0 518 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 COL2A1P02458 1487 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-204ENST00000414862 RFX7Q2KHR2 1363 aa9.5□□□□□ -0.89
TRA2B-204ENST00000414862 NBPF7P0C2Y1 421 aaPredicted RBP9.49□□□□□ -0.89
TRA2B-204ENST00000414862 COL6A1P12109 1028 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 FGFR2P21802 821 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 GDNFP39905 211 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 IRX3P78415 501 aaPredicted RBP9.49□□□□□ -0.89
TRA2B-204ENST00000414862 LRRC26Q2I0M4 334 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 MAP3K21Q5TCX8 1036 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 ZFPM1Q8IX07 1006 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 CCAR1Q8IX12 1150 aaKnown RBP9.49□□□□□ -0.89
TRA2B-204ENST00000414862 ZGPATQ8N5A5 531 aaKnown RBP9.49□□□□□ -0.89
TRA2B-204ENST00000414862 NAT16Q8N8M0 369 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 MAP6Q96JE9 813 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 FCRL2Q96LA5 508 aaPredicted RBP9.49□□□□□ -0.89
TRA2B-204ENST00000414862 C19orf73Q9NVV2 129 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 ERVK13-1Q9NX77 482 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 SALL1Q9NSC2 1324 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
TRA2B-204ENST00000414862 FGF10O15520 208 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-204ENST00000414862 CAPNS1P04632 268 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 CYP2B6P20813 491 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 HOXC12P31275 282 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 GRIA2P42262 883 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 SEPHS1P49903 392 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 HMGCS2P54868 508 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 EXOSC9Q06265 439 aaKnown RBP9.48□□□□□ -0.89
TRA2B-204ENST00000414862 SCRN1Q12765 414 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 SPP2Q13103 211 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 PICALMQ13492 652 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-204ENST00000414862 AARSD1Q9BTE6 412 aaKnown RBP9.48□□□□□ -0.89
TRA2B-204ENST00000414862 ARHGEF4Q9NR80 690 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-204ENST00000414862 ADGRE2Q9UHX3 823 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 GJD2Q9UKL4 321 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 DENND2AQ9ULE3 1009 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 CTNND2Q9UQB3 1225 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 DOCK1Q14185 1865 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 UTYO14607 1347 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 GAKO14976 1311 aa9.48□□□□□ -0.89
TRA2B-204ENST00000414862 AK9Q5TCS8 1911 aa9.47□□□□□ -0.89
TRA2B-204ENST00000414862 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-204ENST00000414862 MAPK4P31152 587 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms