RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 A0A1W2PQ45 241 aaPredicted RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 A0A1W2PQY0 241 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 CYP2C9P11712 490 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 DNM2P50570 870 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 TMEM62Q0P6H9 643 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 TPD52L1Q16890 204 aaPredicted RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 STXBP4Q6ZWJ1 553 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 WNT8BQ93098 351 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 SRRTQ9BXP5 876 aaKnown RBP10.64□□□□□ -0.71
RIF1-202ENST00000414861 MINDY3Q9H8M7 445 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 IFT122Q9HBG6 1241 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 TRAF3IP3Q9Y228 551 aa10.64□□□□□ -0.71
RIF1-202ENST00000414861 MOXD2PA6NHM9 499 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 PDXKO00764 312 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 CLIC2O15247 247 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 CSDE1O75534 798 aaKnown RBP10.63□□□□□ -0.71
RIF1-202ENST00000414861 TMOD1P28289 359 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 SLC39A4Q6P5W5 647 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 SLC17A8Q8NDX2 589 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 DNAJB3Q8WWF6 145 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 ACCSQ96QU6 501 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 TSG101Q99816 390 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 TSEN34Q9BSV6 310 aaKnown RBP10.63□□□□□ -0.71
RIF1-202ENST00000414861 CCDC113Q9H0I3 377 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 GBP3Q9H0R5 595 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 AGPAT3Q9NRZ7 376 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 A0A087WZ62 844 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 SMIM35A0A1B0GVV1 85 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 IQCF3P0C7M6 154 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 GPC3P51654 580 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 ITGA7Q13683 1181 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 EDRF1Q3B7T1 1238 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 FOXR2Q6PJQ5 311 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 ZC3H3Q8IXZ2 948 aaKnown RBP10.63□□□□□ -0.71
RIF1-202ENST00000414861 SYCP3Q8IZU3 236 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 KCNN1Q92952 543 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 ARMC5Q96C12 935 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 HVCN1Q96D96 273 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 FDXACB1Q9BRP7 624 aaPredicted RBP10.63□□□□□ -0.71
RIF1-202ENST00000414861 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
RIF1-202ENST00000414861 KBTBD13C9JR72 458 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 NR3C1P04150 777 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 NR2F2P24468 414 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
RIF1-202ENST00000414861 PTENP60484 403 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 KIZQ2M2Z5 673 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 APTXQ7Z2E3 356 aaKnown RBP10.62□□□□□ -0.71
RIF1-202ENST00000414861 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 VTI1AQ96AJ9 217 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 CBWD1Q9BRT8 395 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 THAP9Q9H5L6 903 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 OGDHLQ9ULD0 1010 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 DNM1LO00429 736 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 HNRNPDLO14979 420 aaKnown RBP10.62□□□□□ -0.71
RIF1-202ENST00000414861 CABYRO75952 493 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 GNAT1P11488 350 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 ADSSP30520 456 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 FKBP3Q00688 224 aaKnown RBP10.62□□□□□ -0.71
RIF1-202ENST00000414861 MBTD1Q05BQ5 628 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 TFDP1Q14186 410 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 ZSWIM2Q8NEG5 633 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 NLRP7Q8WX94 980 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 ADAMTS10Q9H324 1103 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 TMEM206Q9H813 350 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
RIF1-202ENST00000414861 TRMT13Q9NUP7 481 aaKnown RBP10.62□□□□□ -0.71
RIF1-202ENST00000414861 KCNJ18B7U540 433 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 H0YCG3 227 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 K7ERI5 159 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 ASAP2O43150 1006 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 CALUO43852 315 aaPredicted RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 GPR32O75388 356 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 CASP4P49662 377 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 MNX1P50219 401 aaPredicted RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 TPM4P67936 248 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 FANCCQ00597 558 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 KCNJ12Q14500 433 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 PKN2Q16513 984 aaKnown RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 TCP11X2Q5H9J9 407 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 HS2ST1Q7LGA3 356 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 SERINC5Q86VE9 423 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 CNOT6LQ96LI5 555 aaKnown RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 NFKBIZQ9BYH8 718 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 TMEM134Q9H6X4 195 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 STARD7Q9NQZ5 370 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 GINS2Q9Y248 185 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 B4GALT5O43286 388 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 PRKCBP05771 671 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 PHKA2P46019 1235 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 CYP2J2P51589 502 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 EFNA5P52803 228 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms