RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 LARSQ9P2J5 1176 aaKnown RBP18.21■□□□□ 0.51
LINC00398-201ENST00000414407 USP25Q9UHP3 1055 aa18.21■□□□□ 0.51
LINC00398-201ENST00000414407 DENND3A2RUS2 1198 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 INO80B-WBP1J3KQ70 363 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 PFKFB1P16118 471 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 SCP2P22307 547 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 FGFR4P22455 802 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 NPTX2P47972 431 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 AMPD3Q01432 767 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 NCBP1Q09161 790 aaKnown RBP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 FAM187BQ17R55 369 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 LINC01599Q8WXQ3 324 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 MRPS27Q92552 414 aaKnown RBP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 DDX12PQ92771 950 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 KCNN1Q92952 543 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 ADAM2Q99965 735 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 TRAIPQ9BWF2 469 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 FZD8Q9H461 694 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 AGPAT5Q9NUQ2 364 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 PRMT7Q9NVM4 692 aaPredicted RBP18.2■□□□□ 0.5
LINC00398-201ENST00000414407 DACT1Q9NYF0 836 aa18.2■□□□□ 0.5
LINC00398-201ENST00000414407 NPHP3-ACAD11A0A0J9YXS1 232 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 A0A1B0GVL5 298 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 MYMKA6NI61 221 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 MGEA5O60502 916 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 ERLIN2O94905 339 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 SLFN14P0C7P3 912 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 SMTNP53814 917 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 PEX3P56589 373 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 FAM189BP81408 668 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 DEFB103AP81534 67 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 RAD51AP2Q09MP3 1159 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 CNNM4Q6P4Q7 775 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 MICAL3Q7RTP6 2002 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 TMEM134Q9H6X4 195 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 PARVGQ9HBI0 331 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 KMT5AQ9NQR1 393 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 ARHGAP28Q9P2N2 729 aa18.19■□□□□ 0.5
LINC00398-201ENST00000414407 CCDC169A6NNP5 214 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 C9IYK1 514 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 H0YCG3 227 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
LINC00398-201ENST00000414407 FAM13AO94988 1023 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 HOXA11P31270 313 aaPredicted RBP18.18■□□□□ 0.5
LINC00398-201ENST00000414407 SARSP49591 514 aaKnown RBP18.18■□□□□ 0.5
LINC00398-201ENST00000414407 MAPK6Q16659 721 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 AMHR2Q16671 573 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 CLEC17AQ6ZS10 378 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 CEP57L1Q8IYX8 460 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 MYOCDQ8IZQ8 938 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 CRIPAKQ8N1N5 446 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 TMEM87AQ8NBN3 555 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 DNAJC19Q96DA6 116 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 CCDC51Q96ER9 411 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 CCDC113Q9H0I3 377 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 ELAC1Q9H777 363 aaKnown RBP18.18■□□□□ 0.5
LINC00398-201ENST00000414407 PIN4Q9Y237 131 aaKnown RBP18.18■□□□□ 0.5
LINC00398-201ENST00000414407 ADGRA3Q8IWK6 1321 aa18.18■□□□□ 0.5
LINC00398-201ENST00000414407 ACKR2O00590 384 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 TSPAN1O60635 241 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 GJB5O95377 273 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 STAG3L1P0CL83 205 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 SKIP12755 728 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 ABCD1P33897 745 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 SYKP43405 635 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 NDUFA8P51970 172 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
LINC00398-201ENST00000414407 RAB30Q15771 203 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 FAM109BQ6ICB4 259 aaPredicted RBP18.17■□□□□ 0.5
LINC00398-201ENST00000414407 DYMQ7RTS9 669 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 NPAS4Q8IUM7 802 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 MYCT1Q8N699 235 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 SLC17A8Q8NDX2 589 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 SEL1LQ9UBV2 794 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 PCDHA11Q9Y5I1 949 aa18.17■□□□□ 0.5
LINC00398-201ENST00000414407 A0A0U1RQF3 1178 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 FRMD3A2A2Y4 597 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 RBAK-RBAKDNI3L0D1 243 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 K7ERI5 159 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 ACTN4O43707 911 aaKnown RBP18.16■□□□□ 0.5
LINC00398-201ENST00000414407 MAPTP10636 758 aaKnown RBP18.16■□□□□ 0.5
LINC00398-201ENST00000414407 GAP43P17677 238 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 RAB27AP51159 221 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 NCKAP1LP55160 1127 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 NOTUMQ6P988 496 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 TMEM161BQ8NDZ6 487 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 RAD9AQ99638 391 aa18.16■□□□□ 0.5
LINC00398-201ENST00000414407 C7orf25Q9BPX7 421 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms