RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PCDHB12Q9Y5F1 795 aa29.27■■■□□ 2.28
VEGFA-207ENST00000413642 GTF2F1P35269 517 aaKnown RBP eCLIP29.26■■■□□ 2.273e-11■■■■■ 42.3
VEGFA-207ENST00000413642 CCT6AP40227 531 aaKnown RBP29.26■■■□□ 2.27
VEGFA-207ENST00000413642 PTENP60484 403 aa29.26■■■□□ 2.27
VEGFA-207ENST00000413642 MXD4Q14582 209 aaPredicted RBP29.26■■■□□ 2.27
VEGFA-207ENST00000413642 AAASQ9NRG9 546 aa29.26■■■□□ 2.27
VEGFA-207ENST00000413642 DBR1Q9UK59 544 aaKnown RBP29.26■■■□□ 2.27
VEGFA-207ENST00000413642 PP2D1A8MPX8 630 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 FGF18O76093 207 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 HYAL1Q12794 435 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 UBXN11Q5T124 520 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 EP400NLQ6ZTU2 488 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 THNSL1Q8IYQ7 743 aa29.25■■■□□ 2.27
VEGFA-207ENST00000413642 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-207ENST00000413642 LAG3P18627 525 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 LARP1BQ659C4 914 aaKnown RBP29.24■■■□□ 2.27
VEGFA-207ENST00000413642 ADGRD2Q7Z7M1 963 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 LRRC43Q8N309 656 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 IGFLR1Q9H665 355 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 POLD4Q9HCU8 107 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 PCDHB2Q9Y5E7 798 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 KIAA1671Q9BY89 1806 aa29.24■■■□□ 2.27
VEGFA-207ENST00000413642 H3BQ06 376 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-207ENST00000413642 INO80B-WBP1J3KQ70 363 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 TSPAN1O60635 241 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 CDC25AP30304 524 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 CUL4AQ13619 759 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 TFDP1Q14186 410 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 PADI6Q6TGC4 694 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 IGSF22Q8N9C0 903 aa29.23■■■□□ 2.27
VEGFA-207ENST00000413642 UHRF1Q96T88 793 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-207ENST00000413642 FNDC1Q4ZHG4 1894 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-207ENST00000413642 ARID2Q68CP9 1835 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 ZNF623O75123 536 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 MBTD1Q05BQ5 628 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 PDIA5Q14554 519 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 RILPL1Q5EBL4 403 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 HAUS3Q68CZ6 603 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 KCNT2Q6UVM3 1135 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 IFNLR1Q8IU57 520 aaPredicted RBP29.22■■■□□ 2.27
VEGFA-207ENST00000413642 PABPC5Q96DU9 382 aaKnown RBP29.22■■■□□ 2.27
VEGFA-207ENST00000413642 CPB2Q96IY4 423 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 CLDND1Q9NY35 253 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 KIAA1024Q9UPX6 916 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 INPP5FQ9Y2H2 1132 aa29.22■■■□□ 2.27
VEGFA-207ENST00000413642 ARHGEF35A5YM69 484 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 LINC01565O15544 149 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 ERLIN2O94905 339 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 RAB27AP51159 221 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 ERVFC1P60507 584 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 COL19A1Q14993 1142 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 AMHR2Q16671 573 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-207ENST00000413642 SNX29Q8TEQ0 813 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 BSNDQ8WZ55 320 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 ZNF558Q96NG5 402 aa29.21■■■□□ 2.27
VEGFA-207ENST00000413642 B4GALT5O43286 388 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 OFD1O75665 1012 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 SKIP12755 728 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 LTBRP36941 435 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 POU5F1BQ06416 359 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 LEXMQ3ZCV2 418 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 AGMOQ6ZNB7 445 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 MICAL1Q8TDZ2 1067 aa29.2■■■□□ 2.26
VEGFA-207ENST00000413642 EIF2AQ9BY44 585 aaKnown RBP29.2■■■□□ 2.26
VEGFA-207ENST00000413642 DDX19AQ9NUU7 478 aaKnown RBP29.2■■■□□ 2.26
VEGFA-207ENST00000413642 NT5C1B-RDH14C9J2C7 533 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 CYP11B2P19099 503 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 PRPHP41219 470 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 AFF1P51825 1210 aaKnown RBP29.19■■■□□ 2.26
VEGFA-207ENST00000413642 DLX2Q07687 328 aaPredicted RBP29.19■■■□□ 2.26
VEGFA-207ENST00000413642 DTHD1Q6ZMT9 781 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 MRPL10Q7Z7H8 261 aaKnown RBP29.19■■■□□ 2.26
VEGFA-207ENST00000413642 RBM23Q86U06 439 aaKnown RBP29.19■■■□□ 2.26
VEGFA-207ENST00000413642 MCPH1Q8NEM0 835 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 MMTAG2Q9BU76 263 aaKnown RBP29.19■■■□□ 2.26
VEGFA-207ENST00000413642 BHMT2Q9H2M3 363 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 GTF3C3Q9Y5Q9 886 aa29.19■■■□□ 2.26
VEGFA-207ENST00000413642 LRRIQ4A6NIV6 560 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 E9PMD0 336 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 LAD1O00515 517 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 ATP2C1P98194 919 aaPredicted RBP29.18■■■□□ 2.26
VEGFA-207ENST00000413642 CSPP1Q1MSJ5 1256 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 NOMO2Q5JPE7 1267 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 GLB1LQ6UWU2 654 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 CDR2LQ86X02 465 aaPredicted RBP29.18■■■□□ 2.26
VEGFA-207ENST00000413642 SMG8Q8ND04 991 aaKnown RBP29.18■■■□□ 2.26
VEGFA-207ENST00000413642 TBC1D13Q9NVG8 400 aa29.18■■■□□ 2.26
VEGFA-207ENST00000413642 MYO7AQ13402 2215 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 ARF4P18085 180 aaPredicted RBP29.17■■■□□ 2.26
VEGFA-207ENST00000413642 MUTP22033 750 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 PLCB3Q01970 1234 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 UBE3AQ05086 875 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 CTC1Q2NKJ3 1217 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 SLC39A11Q8N1S5 342 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 MRPS27Q92552 414 aaKnown RBP29.17■■■□□ 2.26
VEGFA-207ENST00000413642 PGBD4Q96DM1 585 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 MRPL9Q9BYD2 267 aaKnown RBP29.17■■■□□ 2.26
VEGFA-207ENST00000413642 NFKBIZQ9BYH8 718 aa29.17■■■□□ 2.26
VEGFA-207ENST00000413642 RAB34Q9BZG1 259 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms