RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 PRAMEF19Q5SWL8 479 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 DPY19L2P1Q6NXN4 242 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-207ENST00000413509 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 TCP11Q8WWU5 503 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 KAT2BQ92831 832 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 SLC35C1Q96A29 364 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 DNAJC7Q99615 494 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 NFKBIZQ9BYH8 718 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 UPF3AQ9H1J1 476 aaKnown RBP9.04□□□□□ -0.96
HDAC9-207ENST00000413509 SPTLC3Q9NUV7 552 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 ZNF215Q9UL58 517 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-207ENST00000413509 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 CAPN11Q9UMQ6 739 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 GABRQQ9UN88 632 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 EXOC7Q9UPT5 735 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 PHLPP2Q6ZVD8 1323 aa9.04□□□□□ -0.96
HDAC9-207ENST00000413509 CCDC169A6NNP5 214 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TISP43B9A030 160 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 H3BRB1 525 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 RNF225M0QZC1 329 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 CLIC2O15247 247 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 PMM2O15305 246 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 MAGEB2O15479 319 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 DUSP11O75319 330 aaKnown RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 ZNF286BP0CG31 522 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 INSRRP14616 1297 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 GARTP22102 1010 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 CNGA1P29973 690 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 VEGFBP49765 207 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 FXR1P51114 621 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 EFNA5P52803 228 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 SP3Q02447 781 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 RBL2Q08999 1139 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 LAMTOR4Q0VGL1 99 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 SYCP1Q15431 976 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 MARCH8Q5T0T0 291 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 FKBP15Q5T1M5 1219 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TRMT1LQ7Z2T5 733 aaKnown RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TLK2Q86UE8 772 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 PPFIBP1Q86W92 1011 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 CNGA4Q8IV77 575 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 FAM186BQ8IYM0 893 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 SYCP3Q8IZU3 236 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 PRPF31Q8WWY3 499 aaKnown RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 PSPC1Q8WXF1 523 aaKnown RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TRIB2Q92519 343 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 CBWD1Q9BRT8 395 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 NUP58Q9BVL2 599 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 EDEM3Q9BZQ6 932 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TUT1Q9H6E5 874 aaKnown RBP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 RNF186Q9NXI6 227 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 HSPBP1Q9NZL4 362 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TRPC6Q9Y210 931 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC9-207ENST00000413509 CENPFP49454 3210 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 KAT6AQ92794 2004 aa9.03□□□□□ -0.96
HDAC9-207ENST00000413509 TTC26A0AVF1 554 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 MBLAC1A4D2B0 266 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 ASAP2O43150 1006 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 DYNC1LI2O43237 492 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 STX10O60499 249 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 NOL4O94818 638 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 TBC1D8O95759 1140 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 GNRH1P01148 92 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 AFPP02771 609 aaKnown RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 EDN1P05305 212 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 SKILP12757 684 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 AKR1A1P14550 325 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 HNRNPH3P31942 346 aaKnown RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 CASP14P31944 242 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 FLT3LGP49771 235 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 KLK7P49862 253 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 CPT1AP50416 773 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 CYP2J2P51589 502 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 GJA9P57773 515 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 ADAM17P78536 824 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 PRKCZQ05513 592 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 KCNMA1Q12791 1236 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 MEA1Q16626 185 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 FAM187BQ17R55 369 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 C1orf220Q5T0J3 134 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 MFSD14CQ5VZR4 134 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 XXYLT1Q8NBI6 393 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 DEPTORQ8TB45 409 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 NAA15Q9BXJ9 866 aaKnown RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 C2orf40Q9H1Z8 148 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 RRAGDQ9NQL2 400 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-207ENST00000413509 SAGE1Q9NXZ1 904 aa9.02□□□□□ -0.97
HDAC9-207ENST00000413509 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms