RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 VPS36Q86VN1 386 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 LMO3Q8TAP4 145 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 HNRNPLLQ8WVV9 542 aaKnown RBP26.71■■□□□ 1.87
VRK2-202ENST00000412104 SPIRE2Q8WWL2 714 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 GPR88Q9GZN0 384 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 C17orf75Q9HAS0 396 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 KMT5AQ9NQR1 393 aa26.71■■□□□ 1.87
VRK2-202ENST00000412104 PFASO15067 1338 aa26.7■■□□□ 1.87
VRK2-202ENST00000412104 N4BP1O75113 896 aaKnown RBP26.7■■□□□ 1.86
VRK2-202ENST00000412104 DGAT1O75907 488 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 SUPT20HL2P0C7V6 817 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 VSNL1P62760 191 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 FSTL1Q12841 308 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 MIS18BP1Q6P0N0 1132 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 RIOX2Q8IUF8 465 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 MYH9P35579 1960 aaKnown RBP26.7■■□□□ 1.86
VRK2-202ENST00000412104 ATP8B3O60423 1300 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 IGSF9BQ9UPX0 1349 aa26.7■■□□□ 1.86
VRK2-202ENST00000412104 DENND3A2RUS2 1198 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 EIF3JO75822 258 aaKnown RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 SASH3O75995 380 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 ICAM3P32942 547 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 IREB2P48200 963 aaKnown RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 PPP3CAQ08209 521 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 LONRF2Q1L5Z9 754 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 C1orf220Q5T0J3 134 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 GADL1Q6ZQY3 521 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 ELP3Q9H9T3 547 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 PDLIM7Q9NR12 457 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 CYP26B1Q9NR63 512 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 FBXO40Q9UH90 709 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 TSKSQ9UJT2 592 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 ANKRD63C9JTQ0 380 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 TUBBP07437 444 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 RFX1P22670 979 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 ALDH5A1P51649 535 aaPredicted RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 ZNF572Q7Z3I7 529 aaPredicted RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 MCPH1Q8NEM0 835 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 PLEKHO2Q8TD55 490 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 PSMB7Q99436 277 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 NTPCRQ9BSD7 190 aaKnown RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 XPNPEP1Q9NQW7 623 aa26.69■■□□□ 1.86
VRK2-202ENST00000412104 RNF216Q9NWF9 866 aaPredicted RBP26.69■■□□□ 1.86
VRK2-202ENST00000412104 DDX3XO00571 662 aaKnown RBP eCLIP26.68■■□□□ 1.862e-11■□□□□ 11.2
VRK2-202ENST00000412104 P4HA2O15460 535 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 ADRB2P07550 413 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 ADSSP30520 456 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 PHLDB3Q6NSJ2 640 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 OLIG1Q8TAK6 271 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 ATP6V0A4Q9HBG4 840 aa26.68■■□□□ 1.86
VRK2-202ENST00000412104 A0A0G2JLL6 359 aaPredicted RBP26.67■■□□□ 1.86
VRK2-202ENST00000412104 GOLGA8IPA6NC78 632 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 GOLGA8JA6NMD2 632 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 IRF6O14896 467 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 ERLIN1O75477 346 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 CXCR5P32302 372 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 GCLMP48507 274 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 C2orf54Q08AI8 447 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 WDR93Q6P2C0 686 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 CYFIP1Q7L576 1253 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 PRRT2Q7Z6L0 340 aaPredicted RBP26.67■■□□□ 1.86
VRK2-202ENST00000412104 PROCA1Q8NCQ7 364 aaPredicted RBP26.67■■□□□ 1.86
VRK2-202ENST00000412104 OTUD5Q96G74 571 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 ADGRA3Q8IWK6 1321 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 RTP1P59025 263 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 CETN1Q12798 172 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 GLIPR1L2Q4G1C9 344 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 EPC2Q52LR7 807 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 BEND6Q5SZJ8 279 aaPredicted RBP26.67■■□□□ 1.86
VRK2-202ENST00000412104 DNAAF5Q86Y56 855 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 FUT8Q9BYC5 575 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 SPATC1LQ9H0A9 340 aa26.67■■□□□ 1.86
VRK2-202ENST00000412104 GRID2IPA4D2P6 1211 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 FTCDO95954 541 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 CNGA1P29973 690 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 PLA2G4AP47712 749 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 PPATQ06203 517 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 XKR3Q5GH77 459 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 SEPT14Q6ZU15 432 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 FMNL3Q8IVF7 1028 aa26.66■■□□□ 1.86
VRK2-202ENST00000412104 LNX1Q8TBB1 728 aaPredicted RBP26.66■■□□□ 1.86
VRK2-202ENST00000412104 ZNF526Q8TF50 670 aaPredicted RBP26.66■■□□□ 1.86
VRK2-202ENST00000412104 SYNGAP1Q96PV0 1343 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 IRX3P78415 501 aaPredicted RBP26.65■■□□□ 1.86
VRK2-202ENST00000412104 ITIH3Q06033 890 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 SNRNP35Q16560 246 aaKnown RBP26.65■■□□□ 1.86
VRK2-202ENST00000412104 ARHGAP44Q17R89 818 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 CBWD2Q8IUF1 395 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 SLC30A5Q8TAD4 765 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 SAAL1Q96ER3 474 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 CLMNQ96JQ2 1002 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 ABCB6Q9NP58 842 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 LRRC37A2A6NM11 1700 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 ATG7O95352 703 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 MCCD1P59942 119 aaPredicted RBP26.65■■□□□ 1.86
VRK2-202ENST00000412104 MTERF2Q49AM1 385 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 MEI1Q5TIA1 1274 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 SLC39A4Q6P5W5 647 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 NCAPG2Q86XI2 1143 aa26.65■■□□□ 1.86
VRK2-202ENST00000412104 U2AF1L4Q8WU68 220 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms