RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 FAM214AQ32MH5 1076 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 PRR16Q569H4 304 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 FAM209AQ5JX71 171 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 IQSEC1Q6DN90 963 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 SLFN12LQ6IEE8 588 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 LRP10Q7Z4F1 713 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 RTN4RL1Q86UN2 441 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 FOXRED1Q96CU9 486 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 TINF2Q9BSI4 451 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 TRPM5Q9NZQ8 1165 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 RNF7Q9UBF6 113 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 SYNPO2Q9UMS6 1093 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 COQ6Q9Y2Z9 468 aa3.72□□□□□ -1.81
HMGB3P2-201ENST00000411913 TMEM200CA6NKL6 621 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 NDUFA10O95299 355 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 C6orf222P0C671 652 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 HKR1P10072 659 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 HNRNPLP14866 589 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 FAM189BP81408 668 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 IRF9Q00978 393 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 ARHGEF19Q8IW93 802 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 SIMC1Q8NDZ2 872 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 SMG7Q92540 1137 aaKnown RBP3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 ZNF669Q96BR6 464 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 COQ10AQ96MF6 247 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 GMLQ99445 158 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 NDC1Q9BTX1 674 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 SLC29A3Q9BZD2 475 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 AKIP1Q9NQ31 210 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 SYBUQ9NX95 663 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 HDAC5Q9UQL6 1122 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 FRMD4BQ9Y2L6 1034 aa3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 EPN1Q9Y6I3 576 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P2-201ENST00000411913 ZNF185O15231 689 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 HOXA3O43365 443 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 NCR1O76036 304 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 PRLP01236 227 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 APOBEC3AP31941 199 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 PLA2G5P39877 138 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 PTTG1IPP53801 180 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 SEC24CP53992 1094 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 CC2D1AQ6P1N0 951 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 GDF7Q7Z4P5 450 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 FAM83AQ86UY5 434 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 MCF2L2Q86YR7 1114 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 C2orf69Q8N8R5 385 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 GLB1L3Q8NCI6 653 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 MAML3Q96JK9 1138 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 UIMC1Q96RL1 719 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 DCLRE1CQ96SD1 692 aaKnown RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 LRFN3Q9BTN0 628 aa3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 CELF4Q9BZC1 486 aaKnown RBP3.7□□□□□ -1.82
HMGB3P2-201ENST00000411913 GAGE12BA1L429 117 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 GAGE12HA6NDE8 117 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 IKBKBO14920 756 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 KLF4O43474 513 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 KRT37O76014 449 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 TYRP1P17643 537 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 GUCY1B3Q02153 619 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 FOXI1Q12951 378 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 VPS72Q15906 364 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 METTL24Q5JXM2 366 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 PRAMEF9Q5VWM5 478 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 FOXB2Q5VYV0 432 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 SPATC1Q76KD6 591 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 OVCH1Q7RTY7 1134 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 BMP8AQ7Z5Y6 402 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 ZBTB38Q8NAP3 1195 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 CAGE1Q8TC20 777 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 LINC00476Q8WZB0 136 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 UBXN4Q92575 508 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 RPGRQ92834 1020 aaKnown RBP3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 PFDN2Q9UHV9 154 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 TLK1Q9UKI8 766 aa3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P2-201ENST00000411913 COL11A2P13942 1736 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 UBA6A0AVT1 1052 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 NRP1O14786 923 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 MTSS1O43312 755 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 ADCY3O60266 1144 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 DNAJC6O75061 913 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 ABCG1P45844 678 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 FNTBP49356 437 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 BCAR1P56945 870 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 SSRP1Q08945 709 aaKnown RBP3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 TTC38Q5R3I4 469 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 LILRA3Q8N6C8 439 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 OR52N2Q8NGI0 321 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 OR5M3Q8NGP4 307 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 SCARB1Q8WTV0 552 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 ARMC5Q96C12 935 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 MAGEB10Q96LZ2 347 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 TUBGCP5Q96RT8 1024 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 PDCD2LQ9BRP1 358 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 TRIM55Q9BYV6 548 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 TANGO6Q9C0B7 1094 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 KIAA1586Q9HCI6 787 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 NDOR1Q9UHB4 597 aa3.68□□□□□ -1.82
HMGB3P2-201ENST00000411913 PIPSLA2A3N6 862 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms