RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CDCA3Q99618 268 aaPredicted RBP24.93■■□□□ 1.58
MSH6-202ENST00000411819 IFT122Q9HBG6 1241 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 C11orf16Q9NQ32 467 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 FAM105AQ9NUU6 356 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 PCDHA12Q9UN75 941 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 INPP5FQ9Y2H2 1132 aa24.93■■□□□ 1.58
MSH6-202ENST00000411819 C19orf67A6NJJ6 358 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 GPR37L1O60883 481 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 SRGAP2CP0DJJ0 459 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 CA8P35219 290 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 RAB27AP51159 221 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 RBM10P98175 930 aaKnown RBP24.92■■□□□ 1.58
MSH6-202ENST00000411819 ST3GAL1Q11201 340 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 COASYQ13057 564 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 TCP11Q8WWU5 503 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 CCDC43Q96MW1 224 aaKnown RBP24.92■■□□□ 1.58
MSH6-202ENST00000411819 MTRQ99707 1265 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 EIF2AK1Q9BQI3 630 aaKnown RBP24.92■■□□□ 1.58
MSH6-202ENST00000411819 TRAIPQ9BWF2 469 aa24.92■■□□□ 1.58
MSH6-202ENST00000411819 NT5C1B-RDH14C9J2C7 533 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 ZBTB39O15060 712 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 DCXO43602 365 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 GAS2O43903 313 aaKnown RBP24.91■■□□□ 1.58
MSH6-202ENST00000411819 ZC3H11AO75152 810 aaKnown RBP eCLIP24.91■■□□□ 1.58
MSH6-202ENST00000411819 EYA4O95677 639 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 CENPBP07199 599 aaPredicted RBP24.91■■□□□ 1.58
MSH6-202ENST00000411819 SRGAP2BP0DMP2 458 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 ALDH7A1P49419 539 aaKnown RBP24.91■■□□□ 1.58
MSH6-202ENST00000411819 GUCY1B3Q02153 619 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 LAMTOR4Q0VGL1 99 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 GLB1LQ6UWU2 654 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 TMC7Q7Z402 723 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 SLC39A11Q8N1S5 342 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 TTC12Q9H892 705 aaPredicted RBP24.91■■□□□ 1.58
MSH6-202ENST00000411819 NGRNQ9NPE2 291 aaKnown RBP24.91■■□□□ 1.58
MSH6-202ENST00000411819 AGPAT5Q9NUQ2 364 aa24.91■■□□□ 1.58
MSH6-202ENST00000411819 WNT7AO00755 349 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 TXKP42681 527 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 BCAR1P56945 870 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 LLGL2Q6P1M3 1020 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 SRGAP1Q7Z6B7 1085 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 CCDC83Q8IWF9 413 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 RNF149Q8NC42 400 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 VN1R2Q8NFZ6 395 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 HCN4Q9Y3Q4 1203 aa24.9■■□□□ 1.58
MSH6-202ENST00000411819 USP15Q9Y4E8 981 aaPredicted RBP24.9■■□□□ 1.58
MSH6-202ENST00000411819 MEIS3P2A8K0S8 358 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 HIDE1A8MVS5 230 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 SLITRK3O94933 977 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 ATP2B1P20020 1258 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 RNASELQ05823 741 aaKnown RBP24.89■■□□□ 1.58
MSH6-202ENST00000411819 SAFBQ15424 915 aaKnown RBP eCLIP24.89■■□□□ 1.58
MSH6-202ENST00000411819 FERMT3Q86UX7 667 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 RSPH1Q8WYR4 309 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 TMEM169Q96HH4 297 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 MINDY3Q9H8M7 445 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 LIMCH1Q9UPQ0 1083 aa24.89■■□□□ 1.58
MSH6-202ENST00000411819 C5orf42Q9H799 3197 aa24.89■■□□□ 1.57
MSH6-202ENST00000411819 SMC1AQ14683 1233 aaKnown RBP24.88■■□□□ 1.57
MSH6-202ENST00000411819 NOMO2Q5JPE7 1267 aa24.88■■□□□ 1.57
MSH6-202ENST00000411819 PGBD4Q96DM1 585 aa24.88■■□□□ 1.57
MSH6-202ENST00000411819 GBP3Q9H0R5 595 aa24.88■■□□□ 1.57
MSH6-202ENST00000411819 TBC1D13Q9NVG8 400 aa24.88■■□□□ 1.57
MSH6-202ENST00000411819 PCDHB2Q9Y5E7 798 aa24.88■■□□□ 1.57
MSH6-202ENST00000411819 POTEMA6NI47 508 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 ASAP2O43150 1006 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 ERLIN2O94905 339 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 MCM7P33993 719 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 TECP42680 631 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 C8orf76Q96K31 380 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 XPNPEP1Q9NQW7 623 aa24.87■■□□□ 1.57
MSH6-202ENST00000411819 PRR33A8MZF0 331 aa24.86■■□□□ 1.57
MSH6-202ENST00000411819 ZNF623O75123 536 aa24.86■■□□□ 1.57
MSH6-202ENST00000411819 URGCPQ8TCY9 931 aa24.86■■□□□ 1.57
MSH6-202ENST00000411819 HSD17B14Q9BPX1 270 aa24.86■■□□□ 1.57
MSH6-202ENST00000411819 MUTYHQ9UIF7 546 aa24.86■■□□□ 1.57
MSH6-202ENST00000411819 OFD1O75665 1012 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 LYPLA2O95372 231 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 TFDP1Q14186 410 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 MXD4Q14582 209 aaPredicted RBP24.85■■□□□ 1.57
MSH6-202ENST00000411819 BMS1Q14692 1282 aaKnown RBP24.85■■□□□ 1.57
MSH6-202ENST00000411819 TMEM173Q86WV6 379 aaPredicted RBP24.85■■□□□ 1.57
MSH6-202ENST00000411819 RNF135Q8IUD6 432 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 MTMR9Q96QG7 549 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 APOL5Q9BWW9 433 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 TMEM60Q9H2L4 133 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 NRDE2Q9H7Z3 1164 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 RSAD1Q9HA92 442 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 ANKEF1Q9NU02 776 aa24.85■■□□□ 1.57
MSH6-202ENST00000411819 CARNS1A5YM72 827 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 INO80B-WBP1J3KQ70 363 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 DGAT1O75907 488 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 ANKRD54Q6NXT1 300 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 AGMOQ6ZNB7 445 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 PIGOQ8TEQ8 1089 aa24.84■■□□□ 1.57
MSH6-202ENST00000411819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 C2orf71A6NGG8 1288 aa24.83■■□□□ 1.57
MSH6-202ENST00000411819 USO1O60763 962 aaKnown RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 HOXA11P31270 313 aaPredicted RBP24.83■■□□□ 1.57
MSH6-202ENST00000411819 RARRES1P49788 294 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms