RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 ADAMTS19Q8TE59 1207 aa21.21■□□□□ 0.99
SF3A1-202ENST00000411423 POF1BQ8WVV4 589 aa21.21■□□□□ 0.99
SF3A1-202ENST00000411423 POLR3FQ9H1D9 316 aaPredicted RBP21.21■□□□□ 0.99
SF3A1-202ENST00000411423 FAM105AQ9NUU6 356 aa21.21■□□□□ 0.99
SF3A1-202ENST00000411423 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
SF3A1-202ENST00000411423 DBR1Q9UK59 544 aaKnown RBP21.21■□□□□ 0.99
SF3A1-202ENST00000411423 ASAP2O43150 1006 aa21.2■□□□□ 0.98
SF3A1-202ENST00000411423 EOMESO95936 686 aa21.2■□□□□ 0.98
SF3A1-202ENST00000411423 CDC25AP30304 524 aa21.2■□□□□ 0.98
SF3A1-202ENST00000411423 AMHR2Q16671 573 aa21.2■□□□□ 0.98
SF3A1-202ENST00000411423 NAALADL2Q58DX5 795 aa21.2■□□□□ 0.98
SF3A1-202ENST00000411423 IFNLR1Q8IU57 520 aaPredicted RBP21.2■□□□□ 0.98
SF3A1-202ENST00000411423 RNF216Q9NWF9 866 aaPredicted RBP21.2■□□□□ 0.98
SF3A1-202ENST00000411423 TSPAN1O60635 241 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 AFF1P51825 1210 aaKnown RBP21.19■□□□□ 0.98
SF3A1-202ENST00000411423 MBTD1Q05BQ5 628 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.19■□□□□ 0.98
SF3A1-202ENST00000411423 BSNDQ8WZ55 320 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 SYMPKQ92797 1274 aaKnown RBP21.19■□□□□ 0.98
SF3A1-202ENST00000411423 NACC1Q96RE7 527 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 MMTAG2Q9BU76 263 aaKnown RBP21.19■□□□□ 0.98
SF3A1-202ENST00000411423 POLD4Q9HCU8 107 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 LRWD1Q9UFC0 647 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 KIF3AQ9Y496 699 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 BRWD1Q9NSI6 2320 aa21.19■□□□□ 0.98
SF3A1-202ENST00000411423 H3BQV1 296 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 LINC01565O15544 149 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 HOXA2O43364 376 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 B4GALT3O60512 393 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 ZNF623O75123 536 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 FGF18O76093 207 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 KCNA5P22460 613 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 LTBRP36941 435 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 CCT6AP40227 531 aaKnown RBP21.18■□□□□ 0.98
SF3A1-202ENST00000411423 ERVFC1P60507 584 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 MXD4Q14582 209 aaPredicted RBP21.18■□□□□ 0.98
SF3A1-202ENST00000411423 AGMOQ6ZNB7 445 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 LRRC43Q8N309 656 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 ERMNQ8TAM6 284 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.18■□□□□ 0.98
SF3A1-202ENST00000411423 PCDHB2Q9Y5E7 798 aa21.18■□□□□ 0.98
SF3A1-202ENST00000411423 B4GALT5O43286 388 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 OFD1O75665 1012 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 LAG3P18627 525 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 ATP2C1P98194 919 aaPredicted RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 DLX2Q07687 328 aaPredicted RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 PDIA5Q14554 519 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 CTC1Q2NKJ3 1217 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 LARP1BQ659C4 914 aaKnown RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 PADI6Q6TGC4 694 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 KCNT2Q6UVM3 1135 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 KCNK18Q7Z418 384 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 ABI1Q8IZP0 508 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 SMG8Q8ND04 991 aaKnown RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 SNX29Q8TEQ0 813 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 PABPC5Q96DU9 382 aaKnown RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 CCDC43Q96MW1 224 aaKnown RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 EIF2AQ9BY44 585 aaKnown RBP21.17■□□□□ 0.98
SF3A1-202ENST00000411423 PCDHB12Q9Y5F1 795 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 CUL9Q8IWT3 2517 aa21.17■□□□□ 0.98
SF3A1-202ENST00000411423 TTLL13PA6NNM8 815 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 H3BQ06 376 aaPredicted RBP21.16■□□□□ 0.98
SF3A1-202ENST00000411423 INO80B-WBP1J3KQ70 363 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 PRPHP41219 470 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 POU5F1BQ06416 359 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 AAK1Q2M2I8 961 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 LEXMQ3ZCV2 418 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 MRPL10Q7Z7H8 261 aaKnown RBP21.16■□□□□ 0.98
SF3A1-202ENST00000411423 THNSL1Q8IYQ7 743 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 UHRF1Q96T88 793 aaPredicted RBP21.16■□□□□ 0.98
SF3A1-202ENST00000411423 DDX19AQ9NUU7 478 aaKnown RBP21.16■□□□□ 0.98
SF3A1-202ENST00000411423 KIAA1024Q9UPX6 916 aa21.16■□□□□ 0.98
SF3A1-202ENST00000411423 NT5C1B-RDH14C9J2C7 533 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 E9PMD0 336 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 FSCN2O14926 492 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 EDN1P05305 212 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 ARF4P18085 180 aaPredicted RBP21.15■□□□□ 0.98
SF3A1-202ENST00000411423 CYP11B2P19099 503 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 MUTP22033 750 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 TFDP1Q14186 410 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 HAUS3Q68CZ6 603 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 TMEM173Q86WV6 379 aaPredicted RBP21.15■□□□□ 0.98
SF3A1-202ENST00000411423 CDR2LQ86X02 465 aaPredicted RBP21.15■□□□□ 0.98
SF3A1-202ENST00000411423 NFKBIZQ9BYH8 718 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 BHMT2Q9H2M3 363 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 IGFLR1Q9H665 355 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 AAASQ9NRG9 546 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 CLDND1Q9NY35 253 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 INPP5FQ9Y2H2 1132 aa21.15■□□□□ 0.98
SF3A1-202ENST00000411423 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 LAD1O00515 517 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 TBX10O75333 385 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 RAB27AP51159 221 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 PLCB3Q01970 1234 aa21.14■□□□□ 0.97
SF3A1-202ENST00000411423 CDCA2Q69YH5 1023 aaPredicted RBP21.14■□□□□ 0.97
SF3A1-202ENST00000411423 DTHD1Q6ZMT9 781 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms