RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ATCAYQ86WG3 371 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 CNGA4Q8IV77 575 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 SLITRK4Q8IW52 837 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 ELOA2Q8IYF1 753 aaPredicted RBP-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 CHPFQ8IZ52 775 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 GJD3Q8N144 294 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 SYNPOQ8N3V7 929 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 PTCHD1Q96NR3 888 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 MLXIPQ9HAP2 919 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 TSHZ2Q9NRE2 1034 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 POT1Q9NUX5 634 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 COL20A1Q9P218 1284 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 PCDHB1Q9Y5F3 818 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 NCOR2Q9Y618 2525 aa-0.7□□□□□ -2.52
RNU4-88P-201ENST00000411220 ESYT3A0FGR9 886 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 USP17L3A6NCW0 530 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 USP17L4A6NCW7 530 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 B4DGG1 531 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 PPP1R11O60927 126 aaPredicted RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 SRSF10O75494 262 aaKnown RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 CEACAM8P31997 349 aaPredicted RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 FUSP35637 526 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 KCNJ5P48544 419 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 GZMKP49863 264 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 RBM10P98175 930 aaKnown RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 POU5F1BQ06416 359 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 KRT33BQ14525 404 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 KRTAP19-8Q3LI54 63 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 SUMO4Q6EEV6 95 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 VASNQ6EMK4 673 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 KLHDC10Q6PID8 442 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 USP17L2Q6R6M4 530 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 FAM111BQ6SJ93 734 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 USP17L1Q7RTZ2 530 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 Q8N7P7 452 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 C16orf52Q8NHV5 167 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 ATP2A3Q93084 1043 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 MED30Q96HR3 178 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 SLC12A9Q9BXP2 914 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 UNKQ9C0B0 810 aaKnown RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 FAM234AQ9H0X4 552 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 RTN4Q9NQC3 1192 aaKnown RBP-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 TRPM5Q9NZQ8 1165 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 POU2F3Q9UKI9 436 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 BAHCC1Q9P281 2608 aa-0.71□□□□□ -2.52
RNU4-88P-201ENST00000411220 FRAS1Q86XX4 4008 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 EVPLQ92817 2033 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 LRP1Q07954 4544 aaKnown RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 A0A1B0GUV1 79 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 SMIM35A0A1B0GVV1 85 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 KLLNB2CW77 178 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 IFNL4K9M1U5 179 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 PSG1P11464 419 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 ARHGAP25P42331 645 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 GLRBP48167 497 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 YARSP54577 528 aaKnown RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 COASYQ13057 564 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 IRF5Q13568 498 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 SAFB2Q14151 953 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 AMER1Q5JTC6 1135 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 TSTD2Q5T7W7 516 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 MFSD5Q6N075 450 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 PDZRN4Q6ZMN7 1036 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 LARP4Q71RC2 724 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 ZNF547Q8IVP9 402 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 CBARPQ8N350 705 aaPredicted RBP-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 FAM13CQ8NE31 585 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 RABGGTAQ92696 567 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 CAMKK2Q96RR4 588 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 ADAM2Q99965 735 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 UBXN6Q9BZV1 441 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 NTN4Q9HB63 628 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 CD93Q9NPY3 652 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 ABCB10Q9NRK6 738 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 GULP1Q9UBP9 304 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 ADAM30Q9UKF2 790 aa-0.72□□□□□ -2.52
RNU4-88P-201ENST00000411220 FBLL1A6NHQ2 334 aaKnown RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 FZD9O00144 591 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 HMGCRP04035 888 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 HLA-DOAP06340 250 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 GSNP06396 782 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 PRF1P14222 555 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 CDK8P49336 464 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 ATP12AP54707 1039 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 PTPN11Q06124 597 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 PDE4BQ07343 736 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 DPYDQ12882 1025 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 RBMS2Q15434 407 aaKnown RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 SKIDA1Q1XH10 827 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 LARP1BQ659C4 914 aaKnown RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 PDXDC1Q6P996 788 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 DTHD1Q6ZMT9 781 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 MEX3BQ6ZN04 569 aaKnown RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 NLRC3Q7RTR2 1065 aa-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 SPATA2LQ8IUW3 424 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 MUC20Q8N307 709 aaPredicted RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 ZCCHC13Q8WW36 166 aaKnown RBP-0.73□□□□□ -2.53
RNU4-88P-201ENST00000411220 BBXQ8WY36 941 aaPredicted RBP-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms