RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 AKT3Q9Y243 479 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAN1Q9Y2M0 1017 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MRPS17Q9Y2R5 130 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCDHA8Q9Y5H6 950 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAFBQ9Y5Q3 323 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZFP37Q9Y6Q3 630 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NUMBLQ9Y6R0 609 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NAV2Q8IVL1 2488 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ACACAQ13085 2346 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CACNA1EQ15878 2313 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CLUHO75153 1309 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 SALL3Q9BXA9 1300 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYO15AQ9UKN7 3530 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYH7BA7E2Y1 1941 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 KIAA1217Q5T5P2 1943 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZBTB42B2RXF5 422 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDX39AO00148 427 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MEIS1O00470 390 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 C2CD2LO14523 706 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TEX28O15482 410 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 GAS2O43903 313 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 LRP3O75074 770 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF623O75123 536 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 OFD1O75665 1012 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RFPL2O75678 378 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZMYND10O75800 440 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDAH1O94760 285 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCNE2O96020 404 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 C1RP00736 705 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 FOSP01100 380 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 SOD2P04179 222 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PROS1P07225 676 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PSAPP07602 524 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYBP10242 640 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 KCNA4P22459 653 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 SFPQP23246 707 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PMLP29590 882 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF76P36508 570 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PHKA2P46019 1235 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RPS9P46781 194 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLUD2P49448 558 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RAB27AP51159 221 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CLCN3P51790 818 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ADCY1Q08828 1119 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPEM2Q0P670 501 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ITGB3BPQ13352 177 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CSRP2Q16527 193 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 UBE2SQ16763 222 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 LONRF3Q496Y0 759 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 N4BP2L1Q5TBK1 243 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 C20orf194Q5TEA3 1177 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 IL31Q6EBC2 164 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TWF2Q6IBS0 349 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TSSK4Q6SA08 328 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ABHD15Q6UXT9 468 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF852Q6ZMS4 543 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAMSTRQ6ZN01 415 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRR23CQ6ZRP0 262 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRR23BQ6ZRT6 265 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTSS1LQ765P7 747 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CYB5R4Q7L1T6 521 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 GET4Q7L5D6 327 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RALYLQ86SE5 291 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF280BQ86YH2 543 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCDC60Q8IWA6 550 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TEX2Q8IWB9 1127 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 GPR65Q8IYL9 337 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMTC2Q8N394 836 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 LRRC71Q8N4P6 559 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 NCOA7Q8NI08 942 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 URGCPQ8TCY9 931 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 BCL7CQ8WUZ0 217 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 NLRP7Q8WX94 980 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 FGF14Q92915 247 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 LPPQ93052 612 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CLDN23Q96B33 292 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF707Q96C28 371 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PGBD4Q96DM1 585 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF668Q96K58 619 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM167AQ96KS9 214 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM193BQ96PV7 902 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAP3K14Q99558 947 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMEM175Q9BSA9 504 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYL10Q9BUA6 226 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RPP25Q9BUL9 199 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDX23Q9BUQ8 820 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 VN1R3Q9BXE9 311 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 ANO3Q9BYT9 981 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 GCOM2Q9BZD3 368 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRKD2Q9BZL6 878 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 INO80BQ9C086 356 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 NT5C3AQ9H0P0 336 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 LY9Q9HBG7 655 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RXFP1Q9HBX9 757 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 AGO4Q9HCK5 861 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRMT8Q9NR22 394 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 NRBP2Q9NSY0 501 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 SEMA4GQ9NTN9 838 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TBC1D22BQ9NU19 505 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms