RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FAM126BQ8IXS8 530 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 NXPE1Q8N323 547 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZNF610Q8N9Z0 462 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GIMAP8Q8ND71 665 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CHTF18Q8WVB6 975 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 JDP2Q8WYK2 163 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DPF3Q92784 378 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CHMP4CQ96CF2 233 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CAMKK2Q96RR4 588 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TMEM209Q96SK2 561 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MTFR1LQ9H019 292 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 OXSMQ9NWU1 459 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GOLGA6AQ9NYA3 693 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PPARGC1AQ9UBK2 798 aaKnown RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 B3GALT1Q9Y5Z6 326 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CD109Q6YHK3 1445 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 IQSEC2Q5JU85 1478 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ARAP3Q8WWN8 1544 aa3.4□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZNF891A8MT65 544 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 K7ESF4 209 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TRAF5O00463 557 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NEMP1O14524 444 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLC27A2O14975 620 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NRP2O60462 931 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 DTNBO60941 627 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ALDH1L1O75891 902 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ENO2P09104 434 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 COL6A2P12110 1019 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ATP2A2P16615 1042 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KCNA6P17658 529 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 XPAP23025 273 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CDKN1CP49918 316 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NEK2P51955 445 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLC5A3P53794 718 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 BCAR1P56945 870 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 JAM2P57087 298 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FAM50AQ14320 339 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SEPT7Q16181 437 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PAN2Q504Q3 1202 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 BRDTQ58F21 947 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 EPHA10Q5JZY3 1008 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AGBL4Q5VU57 503 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NOL8Q76FK4 1167 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZNF627Q7L945 461 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PNMA8AQ86V59 439 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 OSTM1Q86WC4 334 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NOSTRINQ8IVI9 506 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CCAR1Q8IX12 1150 aaKnown RBP3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KLHL36Q8N4N3 616 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CNTD1Q8N815 330 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 EDAQ92838 391 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RAX2Q96IS3 184 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SMURF1Q9HCE7 757 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 HSPBP1Q9NZL4 362 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FBXO10Q9UK96 956 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ADCY10Q96PN6 1610 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 GOLGA3Q08378 1498 aa3.4□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RUSC2Q8N2Y8 1516 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TCRBV5S2A0A599 114 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAN2B1O00754 1011 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NKRFO15226 690 aaKnown RBP eCLIP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KDM1AO60341 852 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PPP1R11O60927 126 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RPLP2P05387 115 aaKnown RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FAHP16930 419 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MAKP20794 623 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLC16A1P53985 500 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MLLT6P55198 1093 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NRG3P56975 720 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 KLF1Q13351 362 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TUBA3CQ13748 450 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PPP2R5AQ15172 486 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CCDC178Q5BJE1 867 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FNDC7Q5VTL7 733 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ABHD17CQ6PCB6 329 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TUBA3EQ6PEY2 450 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MIB1Q86YT6 1006 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 RPUSD2Q8IZ73 545 aaKnown RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZNF483Q8TF39 744 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CACTINQ8WUQ7 758 aaKnown RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CLIC6Q96NY7 704 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 LRRC37BQ96QE4 947 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TUBGCP5Q96RT8 1024 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SMAD5Q99717 465 aaKnown RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FOXB1Q99853 325 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TTPALQ9BTX7 342 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SLC13A1Q9BZW2 595 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 BARX1Q9HBU1 254 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 AASDHPPTQ9NRN7 309 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SPTLC3Q9NUV7 552 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 MKS1Q9NXB0 559 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FTSJ1Q9UET6 329 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SAP30BPQ9UHR5 308 aaKnown RBP3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FBXL7Q9UJT9 491 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TRHDEQ9UKU6 1024 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PTPRMP28827 1452 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NEO1Q92859 1461 aa3.39□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ARID4BQ4LE39 1312 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms