RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 AAASQ9NRG9 546 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 KIF3AQ9Y496 699 aa19.71■□□□□ 0.75
LSM5-204ENST00000409909 MEIS3P2A8K0S8 358 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 TNFRSF10AO00220 468 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 ZNF623O75123 536 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 FGF18O76093 207 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 LAG3P18627 525 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 FXR2P51116 673 aaKnown RBP eCLIP19.7■□□□□ 0.74
LSM5-204ENST00000409909 PTENP60484 403 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 PTGDRQ13258 359 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 CAPSQ13938 189 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 CTC1Q2NKJ3 1217 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.7■□□□□ 0.74
LSM5-204ENST00000409909 NACC1Q96RE7 527 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 FAM105AQ9NUU6 356 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 DBR1Q9UK59 544 aaKnown RBP19.7■□□□□ 0.74
LSM5-204ENST00000409909 PCDHGC5Q9Y5F6 944 aa19.7■□□□□ 0.74
LSM5-204ENST00000409909 H3BQ06 376 aaPredicted RBP19.69■□□□□ 0.74
LSM5-204ENST00000409909 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
LSM5-204ENST00000409909 GLRA2P23416 452 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 LTBRP36941 435 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 PBX3P40426 434 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 IL17AQ16552 155 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 ECM1Q16610 540 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 UBXN11Q5T124 520 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 KCNT2Q6UVM3 1135 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 ADGRD2Q7Z7M1 963 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 LRRC43Q8N309 656 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 ERMNQ8TAM6 284 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 CCDC43Q96MW1 224 aaKnown RBP19.69■□□□□ 0.74
LSM5-204ENST00000409909 GPRC5CQ9NQ84 441 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 CLDND1Q9NY35 253 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 PCDHB2Q9Y5E7 798 aa19.69■□□□□ 0.74
LSM5-204ENST00000409909 SKIP12755 728 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 ERVFC1P60507 584 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 UBE3AQ05086 875 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 POU5F1BQ06416 359 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 PDIA5Q14554 519 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 EP400NLQ6ZTU2 488 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 MAEAQ7L5Y9 396 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 IFNLR1Q8IU57 520 aaPredicted RBP19.68■□□□□ 0.74
LSM5-204ENST00000409909 BACH2Q9BYV9 841 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 POLR3FQ9H1D9 316 aaPredicted RBP19.68■□□□□ 0.74
LSM5-204ENST00000409909 IGFLR1Q9H665 355 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.68■□□□□ 0.74
LSM5-204ENST00000409909 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
LSM5-204ENST00000409909 LINC01565O15544 149 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 NCK2O43639 380 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 TSPAN1O60635 241 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 RAB27AP51159 221 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 PLCB3Q01970 1234 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 MBTD1Q05BQ5 628 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 DLX2Q07687 328 aaPredicted RBP19.67■□□□□ 0.74
LSM5-204ENST00000409909 TFDP1Q14186 410 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 CSPP1Q1MSJ5 1256 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 MRPL10Q7Z7H8 261 aaKnown RBP19.67■□□□□ 0.74
LSM5-204ENST00000409909 IGSF22Q8N9C0 903 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 ZNF558Q96NG5 402 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
LSM5-204ENST00000409909 H3BQV1 296 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 INO80B-WBP1J3KQ70 363 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 OFD1O75665 1012 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 CCT6AP40227 531 aaKnown RBP19.66■□□□□ 0.74
LSM5-204ENST00000409909 ADAM15Q13444 863 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 AMHR2Q16671 573 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 PADI6Q6TGC4 694 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 AGMOQ6ZNB7 445 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 NFKBIZQ9BYH8 718 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 TLR9Q9NR96 1032 aa19.66■□□□□ 0.74
LSM5-204ENST00000409909 GRXCR2A6NFK2 248 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 PP2D1A8MPX8 630 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 FSCN2O14926 492 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 ERLIN2O94905 339 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 MUTP22033 750 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 NRIP1P48552 1158 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 AFF1P51825 1210 aaKnown RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 PCBP1Q15365 356 aaKnown RBP eCLIP19.65■□□□□ 0.74
LSM5-204ENST00000409909 NOMO2Q5JPE7 1267 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 HAUS3Q68CZ6 603 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 PTCRAQ6ISU1 281 aaPredicted RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 GLB1LQ6UWU2 654 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 RBM23Q86U06 439 aaKnown RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 SMG8Q8ND04 991 aaKnown RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 MCPH1Q8NEM0 835 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 MICAL1Q8TDZ2 1067 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 CPB2Q96IY4 423 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 MRPL9Q9BYD2 267 aaKnown RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 TBC1D13Q9NVG8 400 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 SPG21Q9NZD8 308 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 LZTS1Q9Y250 596 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 INPP5FQ9Y2H2 1132 aa19.65■□□□□ 0.74
LSM5-204ENST00000409909 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.65■□□□□ 0.74
LSM5-204ENST00000409909 ARHGEF35A5YM69 484 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 NT5C1B-RDH14C9J2C7 533 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 LAD1O00515 517 aa19.64■□□□□ 0.73
LSM5-204ENST00000409909 B4GALT5O43286 388 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms