RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 E2F7Q96AV8 911 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 CEP89Q96ST8 783 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 PARPBPQ9NWS1 579 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 PRKAB1Q9Y478 270 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.44
CLK1-203ENST00000409769 CCDC18Q5T9S5 1454 aa6.09□□□□□ -1.44
CLK1-203ENST00000409769 ADCY10Q96PN6 1610 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 PRAMEF22A3QJZ6 481 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 RASSF10A6NK89 507 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 GOLGA6L22H0YM25 854 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 H7C1D1 291 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 DVL2O14641 736 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 CYP17A1P05093 508 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
CLK1-203ENST00000409769 NEK4P51957 841 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 PCBP1Q15365 356 aaKnown RBP eCLIP6.08□□□□□ -1.44
CLK1-203ENST00000409769 CNNM4Q6P4Q7 775 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 KLHDC10Q6PID8 442 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 ANKRD35Q8N283 1001 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 OR14K1Q8NGZ2 314 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 ZNF483Q8TF39 744 aaPredicted RBP6.08□□□□□ -1.44
CLK1-203ENST00000409769 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
CLK1-203ENST00000409769 SPO11Q9Y5K1 396 aa6.08□□□□□ -1.44
CLK1-203ENST00000409769 CAPN14A8MX76 684 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 PDE8AO60658 829 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 KPNA6O60684 536 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
CLK1-203ENST00000409769 MYCLP1P12525 358 aaPredicted RBP6.07□□□□□ -1.44
CLK1-203ENST00000409769 MASP1P48740 699 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 DGCR2P98153 550 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 DHCR24Q15392 516 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 IGFL4Q6B9Z1 124 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 RNF180Q86T96 592 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 TMPRSS6Q8IU80 811 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 EFHBQ8N7U6 833 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
CLK1-203ENST00000409769 FOXB1Q99853 325 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 ZKSCAN5Q9Y2L8 839 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 CTDP1Q9Y5B0 961 aaPredicted RBP6.07□□□□□ -1.44
CLK1-203ENST00000409769 CDK13Q14004 1512 aaKnown RBP6.07□□□□□ -1.44
CLK1-203ENST00000409769 MAGI3Q5TCQ9 1506 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 KDM5BQ9UGL1 1544 aa6.07□□□□□ -1.44
CLK1-203ENST00000409769 GAS7O60861 476 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ATP2A2P16615 1042 aaKnown RBP6.06□□□□□ -1.44
CLK1-203ENST00000409769 STAT3P40763 770 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 STAT5BP51692 787 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 KIF11P52732 1056 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ALDH6A1Q02252 535 aaKnown RBP6.06□□□□□ -1.44
CLK1-203ENST00000409769 RIN1Q13671 783 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 EPHA7Q15375 998 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ZNF174Q15697 407 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 KRT26Q7Z3Y9 468 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 RTN4RL1Q86UN2 441 aaPredicted RBP6.06□□□□□ -1.44
CLK1-203ENST00000409769 NME9Q86XW9 330 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 KIAA1958Q8N8K9 716 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 SMC1BQ8NDV3 1235 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 NEU4Q8WWR8 484 aaPredicted RBP6.06□□□□□ -1.44
CLK1-203ENST00000409769 C16orf92Q96LL3 132 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 PRRX2Q99811 253 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 SLC6A15Q9H2J7 730 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 CAAP1Q9H8G2 361 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 IFT57Q9NWB7 429 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 OXSMQ9NWU1 459 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ATP10BO94823 1461 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 LRRC9Q6ZRR7 1453 aa6.06□□□□□ -1.44
CLK1-203ENST00000409769 ZCCHC11Q5TAX3 1644 aaKnown RBP6.06□□□□□ -1.44
CLK1-203ENST00000409769 EHBP1L1Q8N3D4 1523 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 A0A087X1B8 175 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 A0A1W2PRX2 142 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 SCNN1BP51168 640 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 OCRLQ01968 901 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 ADCY1Q08828 1119 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 CRHR2Q13324 411 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 TMEM132BQ14DG7 1078 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 SEPT7Q16181 437 aaKnown RBP6.05□□□□□ -1.44
CLK1-203ENST00000409769 GPR158Q5T848 1215 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 OR2W6PQ8NHA6 318 aa6.05□□□□□ -1.44
CLK1-203ENST00000409769 SLC7A6OSQ96CW6 309 aaPredicted RBP6.05□□□□□ -1.44
CLK1-203ENST00000409769 SAE1Q9UBE0 346 aaPredicted RBP6.05□□□□□ -1.44
CLK1-203ENST00000409769 TTBK1Q5TCY1 1321 aaPredicted RBP6.04□□□□□ -1.44
CLK1-203ENST00000409769 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
CLK1-203ENST00000409769 BPIP17213 487 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 SOX5P35711 763 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 LSSP48449 732 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 LRRC32Q14392 662 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 ZZZ3Q8IYH5 903 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 ELF4Q99607 663 aaPredicted RBP6.04□□□□□ -1.44
CLK1-203ENST00000409769 IKZF4Q9H2S9 585 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 PCIF1Q9H4Z3 704 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 CEP72Q9P209 647 aa6.04□□□□□ -1.44
CLK1-203ENST00000409769 SUPT6HQ7KZ85 1726 aaKnown RBP6.03□□□□□ -1.44
CLK1-203ENST00000409769 KRT37O76014 449 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 ADCY7P51828 1080 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 PHC1P78364 1004 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 ROM1Q03395 351 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 FNDC7Q5VTL7 733 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms