RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CACNB2Q08289 660 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-204ENST00000409727 RBL2Q08999 1139 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 LAMTOR4Q0VGL1 99 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 STRN3Q13033 797 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 IRF5Q13568 498 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 SYCP1Q15431 976 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 IER5Q5VY09 327 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 TAS1R3Q7RTX0 852 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 MAP4K3Q8IVH8 894 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 RNF149Q8NC42 400 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 GOLGA5Q8TBA6 731 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 TCP11Q8WWU5 503 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 CENPFP49454 3210 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 IGKV6-21A0A0C4DH24 114 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 PGK1P00558 417 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 CCND3P30281 292 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 TBX2Q13207 712 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 GRIK4Q16099 956 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 KIAA0753Q2KHM9 967 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 BRDTQ58F21 947 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 HVCN1Q96D96 273 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 JPH2Q9BR39 696 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 CFHR5Q9BXR6 569 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 SETD4Q9NVD3 440 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 HSPBP1Q9NZL4 362 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 SRRDQ9UH36 339 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 GOLGA8IPA6NC78 632 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 GOLGA8JA6NMD2 632 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 ESPNB1AK53 854 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 H0YCG3 227 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 K7ERI5 159 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 HOXD10P28358 340 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 CASP14P31944 242 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 LIG4P49917 911 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
CHMP3-204ENST00000409727 MTHFD1LQ6UB35 978 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 FRMD5Q7Z6J6 570 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 DMAC2Q9NW81 257 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 PYCARDQ9ULZ3 195 aa13.63□□□□□ -0.23
CHMP3-204ENST00000409727 ADCY3O60266 1144 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
CHMP3-204ENST00000409727 F2P00734 622 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 GYPCP04921 128 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 ADSSP30520 456 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 MXD4Q14582 209 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-204ENST00000409727 MFSD10Q14728 455 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 NFIL3Q16649 462 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 SLC39A4Q6P5W5 647 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 ZNF296Q8WUU4 475 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-204ENST00000409727 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 KAT2BQ92831 832 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 AKT3Q9Y243 479 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 Q9Y3F1 56 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.235e-7■□□□□ 8.3
CHMP3-204ENST00000409727 ITIH6Q6UXX5 1313 aa13.62□□□□□ -0.23
CHMP3-204ENST00000409727 A0A1W2PQC6 194 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 AKR1B15C9JRZ8 316 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 VTNP04004 478 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 MARCH8Q5T0T0 291 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 XXYLT1Q8NBI6 393 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 LMBR1Q8WVP7 490 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 CRACR2AQ9BSW2 395 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 METTL14Q9HCE5 456 aaKnown RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 COL1A2P08123 1366 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 RNF225M0QZC1 329 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 MAGEB2O15479 319 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 SEPT4O43236 478 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 EDN1P05305 212 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TPM1P09493 284 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms