RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SCLYQ96I15 445 aa18.34■□□□□ 0.53
SUMO1-208ENST00000409627 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
SUMO1-208ENST00000409627 ARHGAP28Q9P2N2 729 aa18.34■□□□□ 0.53
SUMO1-208ENST00000409627 NBNO60934 754 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 CXCL10P02778 98 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 RPN1P04843 607 aaKnown RBP18.33■□□□□ 0.52
SUMO1-208ENST00000409627 GHRP10912 638 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 EFNA5P52803 228 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 MBTD1Q05BQ5 628 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 KCNB1Q14721 858 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 GPNMBQ14956 572 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 PCBP1Q15365 356 aaKnown RBP eCLIP18.33■□□□□ 0.52
SUMO1-208ENST00000409627 TMEM161BQ8NDZ6 487 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 SPATA20Q8TB22 786 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.52
SUMO1-208ENST00000409627 KIFC3Q9BVG8 833 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 NUP62CLQ9H1M0 184 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 ST6GALNAC4Q9H4F1 302 aa18.33■□□□□ 0.52
SUMO1-208ENST00000409627 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.52
SUMO1-208ENST00000409627 NOC2LQ9Y3T9 749 aaKnown RBP18.33■□□□□ 0.52
SUMO1-208ENST00000409627 K7ENM7 598 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 SLC16A4O15374 487 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 SMC2O95347 1197 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 SYN1P17600 705 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 SFPQP23246 707 aaKnown RBP eCLIP18.32■□□□□ 0.52
SUMO1-208ENST00000409627 ABCD1P33897 745 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 FAM26FQ5R3K3 315 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 FAM228AQ86W67 206 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 CCDC113Q9H0I3 377 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 TMEM134Q9H6X4 195 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
SUMO1-208ENST00000409627 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
SUMO1-208ENST00000409627 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 RHOBTB3O94955 611 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 CSF2RAP15509 400 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
SUMO1-208ENST00000409627 PSMD2Q13200 908 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 ALCAMQ13740 583 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 CAMK4Q16566 473 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 FAM187BQ17R55 369 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 FAM43BQ6ZT52 329 aaPredicted RBP18.31■□□□□ 0.52
SUMO1-208ENST00000409627 ZNF720Q7Z2F6 126 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 HAUS6Q7Z4H7 955 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 BADQ92934 168 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 SMARCE1Q969G3 411 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 FZD8Q9H461 694 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
SUMO1-208ENST00000409627 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
SUMO1-208ENST00000409627 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
SUMO1-208ENST00000409627 DENND3A2RUS2 1198 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 K7ERI5 159 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 GPR182O15218 404 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 CSDE1O75534 798 aaKnown RBP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PPP1R37O75864 691 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PFKMP08237 780 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 NMT1P30419 496 aaKnown RBP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 CD52P31358 61 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 GTF2BQ00403 316 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 FPGSQ05932 587 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PAK2Q13177 524 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PPIGQ13427 754 aaKnown RBP eCLIP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 MAPK6Q16659 721 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PLEKHG4Q58EX7 1191 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 RPUSD2Q8IZ73 545 aaKnown RBP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 APBB2Q92870 758 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 ERCC4Q92889 916 aaPredicted RBP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 HVCN1Q96D96 273 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
SUMO1-208ENST00000409627 TBC1D7Q9P0N9 293 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 PADI3Q9ULW8 664 aa18.3■□□□□ 0.52
SUMO1-208ENST00000409627 MICAL3Q7RTP6 2002 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 ERLIN2O94905 339 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 GCNT3O95395 438 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 PRKCBP05771 671 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 AMHR2Q16671 573 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
SUMO1-208ENST00000409627 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 TAS1R3Q7RTX0 852 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 CATSPER4Q7RTX7 472 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 DEFB128Q7Z7B8 93 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 SEPT8Q92599 483 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 HPS3Q969F9 1004 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 VWCEQ96DN2 955 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 LBHD1Q9BQE6 289 aaPredicted RBP18.29■□□□□ 0.52
SUMO1-208ENST00000409627 FGFBP2Q9BYJ0 223 aa18.29■□□□□ 0.52
SUMO1-208ENST00000409627 IL23AQ9NPF7 189 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms