RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 VSTM4Q8IW00 320 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 SMAP1Q8IYB5 467 aaPredicted RBP12.33□□□□□ -0.44
SNX13-202ENST00000409604 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
SNX13-202ENST00000409604 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
SNX13-202ENST00000409604 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 HES2Q9Y543 173 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 TLDC2A0PJX2 215 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 PLS3P13797 630 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 FSTL1Q12841 308 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 GIT2Q14161 759 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 UGCGQ16739 394 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 RNF180Q86T96 592 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 MAGED2Q9UNF1 606 aaPredicted RBP12.33□□□□□ -0.44
SNX13-202ENST00000409604 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 MRPS9P82933 396 aaKnown RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 KCNV1Q6PIU1 500 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 PDCL2Q8N4E4 241 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 CHP1Q99653 195 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 MAK16Q9BXY0 300 aaKnown RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 HBP1O60381 514 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 NPTXRO95502 500 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 ZNF18P17022 549 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 DYNLT1P63172 113 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 GFPT1Q06210 699 aaPredicted RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 CRHR2Q13324 411 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 IQCB1Q15051 598 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 C7orf25Q9BPX7 421 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 SELENOOQ9BVL4 669 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 MIS12Q9H081 205 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 THAP9Q9H5L6 903 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 ERLIN1O75477 346 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 ADORA2BP29275 332 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 CASP5P51878 434 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 OR6B2Q6IFH4 312 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
SNX13-202ENST00000409604 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
SNX13-202ENST00000409604 ZMYND10O75800 440 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 AKAP5P24588 427 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 BCAR1P56945 870 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 DRAP1Q14919 205 aaPredicted RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 DNAJC21Q5F1R6 531 aaKnown RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 MAATS1Q7Z4T9 603 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 IPO4Q8TEX9 1081 aaKnown RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 SH3TC2Q8TF17 1288 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 BLOC1S4Q9NUP1 217 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 GOLGA6L10A6NI86 522 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 MAFGO15525 162 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 RHOBTB3O94955 611 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 GPC3P51654 580 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 PPP1R7Q15435 360 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 CAPN12Q6ZSI9 719 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 SLC30A5Q8TAD4 765 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 DEFB118Q96PH6 123 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 GOLGA4Q13439 2230 aaKnown RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 UTRNP46939 3433 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 GOLGA6L10A0A0M3HER8 536 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 STRNO43815 780 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 MOCS3O95396 460 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 SF3A3Q12874 501 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNX13-202ENST00000409604 SEPT7Q16181 437 aaKnown RBP12.31□□□□□ -0.44
SNX13-202ENST00000409604 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
SNX13-202ENST00000409604 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 CYP26A1O43174 497 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 RPS6KA1Q15418 735 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 ATF7IP2Q5U623 682 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 TOGARAM2Q6ZUX3 1019 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 ACAP3Q96P50 834 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms