RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FAM105AQ9NUU6 356 aa21.84■■□□□ 1.09
TSPAN4-209ENST00000409543 CLDND1Q9NY35 253 aa21.84■■□□□ 1.09
TSPAN4-209ENST00000409543 PLXNA4Q9HCM2 1894 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 H3BQ06 376 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 ARL2P36404 184 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 MCM2P49736 904 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 POU5F1BQ06416 359 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 PCBP1Q15365 356 aaKnown RBP eCLIP21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 KCNT2Q6UVM3 1135 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 EP400NLQ6ZTU2 488 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 C4orf32Q8N8J7 132 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 ERMNQ8TAM6 284 aa21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 MRPL9Q9BYD2 267 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-209ENST00000409543 MUC3AQ02505 3323 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 MED24O75448 989 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 CD2BP2O95400 341 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 RPA1P27694 616 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 LTBRP36941 435 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 PTENP60484 403 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 PLCB3Q01970 1234 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 TFDP1Q14186 410 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 PTCRAQ6ISU1 281 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 IFNLR1Q8IU57 520 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 ZNF558Q96NG5 402 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 NACC1Q96RE7 527 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 TLR9Q9NR96 1032 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 DBR1Q9UK59 544 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 LZTS1Q9Y250 596 aa21.82■■□□□ 1.08
TSPAN4-209ENST00000409543 A0A087WWV3 80 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 GRXCR2A6NFK2 248 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 HOXA11P31270 313 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 PPM1AP35813 382 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 TOB1P50616 345 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 FXR2P51116 673 aaKnown RBP eCLIP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 ADAM15Q13444 863 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 NBR1Q14596 966 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 PDE12Q6L8Q7 609 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 ADGRD2Q7Z7M1 963 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 MICAL1Q8TDZ2 1067 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 MRPS27Q92552 414 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 PGBD4Q96DM1 585 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 IGFLR1Q9H665 355 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 PUF60Q9UHX1 559 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 PCDHB2Q9Y5E7 798 aa21.81■■□□□ 1.08
TSPAN4-209ENST00000409543 MUTP22033 750 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 GTF2F1P35269 517 aaKnown RBP eCLIP21.8■■□□□ 1.085e-7■■■■■ 36.5
TSPAN4-209ENST00000409543 ERVFC1P60507 584 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 GLB1LQ6UWU2 654 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 MRPL10Q7Z7H8 261 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 ASAP3Q8TDY4 903 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 LPPQ93052 612 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 NFKBIZQ9BYH8 718 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 SPG21Q9NZD8 308 aa21.8■■□□□ 1.08
TSPAN4-209ENST00000409543 FSCN2O14926 492 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 USO1O60763 962 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 ERLIN2O94905 339 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 GLRA2P23416 452 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 AXLP30530 894 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 KRT17Q04695 432 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 PTGDRQ13258 359 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 CAPSQ13938 189 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 PDIA5Q14554 519 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 LONRF3Q496Y0 759 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 UBXN11Q5T124 520 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 HAUS3Q68CZ6 603 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 EFHBQ8N7U6 833 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 MCPH1Q8NEM0 835 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 FAM50BQ9Y247 325 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 PCDHB6Q9Y5E3 794 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 PCDHGC5Q9Y5F6 944 aa21.79■■□□□ 1.08
TSPAN4-209ENST00000409543 MEIS3P2A8K0S8 358 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 LAD1O00515 517 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 LINC01565O15544 149 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 TSPAN1O60635 241 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 OFD1O75665 1012 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 IL9P15248 144 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 PBX3P40426 434 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 NRIP1P48552 1158 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 DLX2Q07687 328 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 NCBP1Q09161 790 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 NOMO2Q5JPE7 1267 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 POTEGQ6S5H5 508 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 FAM178BQ8IXR5 827 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 SLC39A11Q8N1S5 342 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 POLR3FQ9H1D9 316 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 TLE6Q9H808 572 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 LRWD1Q9UFC0 647 aa21.78■■□□□ 1.08
TSPAN4-209ENST00000409543 CARNS1A5YM72 827 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 INO80B-WBP1J3KQ70 363 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 TBX10O75333 385 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 GJB2P29033 226 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 ALDH7A1P49419 539 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 BCAR1P56945 870 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 MBTD1Q05BQ5 628 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 MCTP1Q6DN14 999 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 AGMOQ6ZNB7 445 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 RBM23Q86U06 439 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 CNNM3Q8NE01 707 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 CCDC51Q96ER9 411 aa21.77■■□□□ 1.08
TSPAN4-209ENST00000409543 RAB34Q9BZG1 259 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms