RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 LAMA2P24043 3122 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 SCN5AQ14524 2016 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 TET1Q8NFU7 2136 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 BAIAP3O94812 1187 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 CHRNA1P02708 482 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 CTSHP09668 335 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 SCP2P22307 547 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 COASYQ13057 564 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 PSMD2Q13200 908 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 MKRN4PQ13434 485 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 ODR4Q5SWX8 454 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 FAM109BQ6ICB4 259 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 RBM43Q6ZSC3 357 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 KIAA0319LQ8IZA0 1049 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 PRPF31Q8WWY3 499 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 OLFML3Q9NRN5 406 aa18.23■□□□□ 0.51
TSPAN4-208ENST00000409531 ABHD14A-ACY1A0A1B0GW23 586 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 GRXCR1A8MXD5 290 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 H0YCG3 227 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 M0QZ92 97 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 KLRC4O43908 158 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 RHOBTB3O94955 611 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 ABCD1P33897 745 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 NAMPTP43490 491 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 SARSP49591 514 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 LAMTOR4Q0VGL1 99 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 DRP2Q13474 957 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 IKBKEQ14164 716 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 KMT5BQ4FZB7 885 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 PLEKHG4Q58EX7 1191 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 SFR1Q86XK3 245 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 RHPN2Q8IUC4 686 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 FAM178BQ8IXR5 827 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 DBF4BQ8NFT6 615 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 PHOSPHO2Q8TCD6 241 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 SPIRE2Q8WWL2 714 aa18.22■□□□□ 0.51
TSPAN4-208ENST00000409531 A0A0C4DFX4 3053 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 SFI1A8K8P3 1242 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 EFCAB14O75071 495 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 MAPTP10636 758 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 GLRA2P23416 452 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 PEX3P56589 373 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 FAM26FQ5R3K3 315 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 ZNF410Q86VK4 478 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 DEFB123Q8N688 67 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 NTPCRQ9BSD7 190 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 MRPL44Q9H9J2 332 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 POLD4Q9HCU8 107 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 KMT5AQ9NQR1 393 aa18.21■□□□□ 0.51
TSPAN4-208ENST00000409531 PHLPP2Q6ZVD8 1323 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 CUL9Q8IWT3 2517 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 LRRIQ4A6NIV6 560 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 VTNP04004 478 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 NPTX2P47972 431 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 MRPS6P82932 125 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 EHHADHQ08426 723 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 MGAT3Q09327 533 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 RNF149Q8NC42 400 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 DEPTORQ8TB45 409 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 ASAP3Q8TDY4 903 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 SEPT8Q92599 483 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 SCLT1Q96NL6 688 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 OSBPL7Q9BZF2 842 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 C2orf40Q9H1Z8 148 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 CDY2AQ9Y6F7 541 aa18.2■□□□□ 0.5
TSPAN4-208ENST00000409531 DNAJB2P25686 324 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 PHKA2P46019 1235 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 KCNJ6P48051 423 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 GPC3P51654 580 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 EFNA5P52803 228 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 ALCAMQ13740 583 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 CAPSQ13938 189 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 TCTN1Q2MV58 587 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 SASS6Q6UVJ0 657 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 Q7L0L9 218 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 ZBTB8OSQ8IWT0 167 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 NLRP7Q8WX94 980 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 BSNDQ8WZ55 320 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 NLRP4Q96MN2 994 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 SLC9A7Q96T83 725 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 NFKBIZQ9BYH8 718 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 CELF4Q9BZC1 486 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 MAN1B1Q9UKM7 699 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 SQORQ9Y6N5 450 aa18.19■□□□□ 0.5
TSPAN4-208ENST00000409531 K7ENM7 598 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 KIF20AO95235 890 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
TSPAN4-208ENST00000409531 PBX2P40425 430 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms