RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GHRP10912 638 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 DMWDQ09019 674 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 XKR3Q5GH77 459 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 NME8Q8N427 588 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 DNERQ8NFT8 737 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 SRPK1Q96SB4 655 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 STRBPQ96SI9 672 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 RGS17Q9UGC6 210 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 IRF1P10914 325 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 PEX3P56589 373 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 RNASE9P60153 205 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 IL31Q6EBC2 164 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 CCDC149Q6ZUS6 474 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 ARMCX6Q7L4S7 300 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 DTNBP1Q96EV8 351 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 TRIM62Q9BVG3 475 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 MOV10L1Q9BXT6 1211 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 SCOCQ9UIL1 159 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 PCDHB4Q9Y5E5 795 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 POLR1AO95602 1720 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 TLDC2A0PJX2 215 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 NFKBIEO00221 500 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 LAD1O00515 517 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 APOEP02649 317 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 NSUN7Q8NE18 718 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 LLPHQ9BRT6 129 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 CTTNBP2NLQ9P2B4 639 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 PCDHB8Q9UN66 801 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 MEIS1O00470 390 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 NEK2P51955 445 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 ESRRGP62508 458 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 NOP14P78316 857 aaKnown RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 LMNB2Q03252 620 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 USP17L6PQ6QN14 398 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 CCDC186Q7Z3E2 898 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 CCT6BQ92526 530 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 SPACA7Q96KW9 195 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 FBXO2Q9UK22 296 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 KCPQ6ZWJ8 1503 aa7.84□□□□□ -1.15
SCN9A-202ENST00000409435 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-202ENST00000409435 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.84□□□□□ -1.16
SCN9A-202ENST00000409435 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.84□□□□□ -1.16
SCN9A-202ENST00000409435 CKBP12277 381 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 OAS2P29728 719 aaKnown RBP7.84□□□□□ -1.16
SCN9A-202ENST00000409435 RFC5P40937 340 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 EVCP57679 992 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 NLRP11P59045 1033 aaKnown RBP7.84□□□□□ -1.16
SCN9A-202ENST00000409435 KRT83P78385 493 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF667Q5HYK9 610 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 BCL9LQ86UU0 1499 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 MYRIPQ8NFW9 859 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 APBB2Q92870 758 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 IL17RAQ96F46 866 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 C11orf84Q9BUA3 381 aaPredicted RBP7.84□□□□□ -1.16
SCN9A-202ENST00000409435 SAGE1Q9NXZ1 904 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 NCKAP1Q9Y2A7 1128 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 TRPV2Q9Y5S1 764 aa7.84□□□□□ -1.16
SCN9A-202ENST00000409435 DYTNA2CJ06 578 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 CD4P01730 458 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PRKCBP05771 671 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 RHOXF2BP0C7M4 288 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 HPDP32754 393 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-202ENST00000409435 FLOT2Q14254 428 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 CLUL1Q15846 466 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 RHOXF2Q9BQY4 288 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PLCB1Q9NQ66 1216 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ANAPC5Q9UJX4 755 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 TNNQ9UQP3 1299 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PCDHB6Q9Y5E3 794 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 KRT86O43790 486 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 CRCPO75575 148 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PDIA3P30101 505 aaKnown RBP7.83□□□□□ -1.16
SCN9A-202ENST00000409435 NFIAQ12857 509 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ITGA7Q13683 1181 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 VWA3BQ502W6 1294 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 C16orf86Q6ZW13 317 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ACER1Q8TDN7 264 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 RABEP2Q9H5N1 569 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 USTQ9Y2C2 406 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 UBR1Q8IWV7 1749 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 LTBP4Q8N2S1 1624 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 FZD9O00144 591 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 SEPT4O43236 478 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ADH1AP07327 375 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 SLC10A3P09131 477 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 ERCC5P28715 1186 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-202ENST00000409435 OAZ1P54368 228 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 TIGD5Q53EQ6 642 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 TAOK1Q7L7X3 1001 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 UBLCP1Q8WVY7 318 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-202ENST00000409435 AK9Q5TCS8 1911 aa7.83□□□□□ -1.16
SCN9A-202ENST00000409435 SLIT2O94813 1529 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms