RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
NIF3L1-204ENST00000409357 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
NIF3L1-204ENST00000409357 BRCA2P51587 3418 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 TRAFD1O14545 582 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 HNRNPCL1O60812 293 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 PEX11AO75192 247 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 UNC5CO95185 931 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 KIF4AO95239 1232 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 TPP2P29144 1249 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 CXCR5P32302 372 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 ZRSR2Q15696 482 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 MFSD5Q6N075 450 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 ZNF384Q8TF68 577 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 DNAJC9Q8WXX5 260 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 MS4A14Q96JA4 679 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 DUSP9Q99956 384 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 IQCGQ9H095 443 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 POLD4Q9HCU8 107 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 ZNF510Q9Y2H8 683 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 LAMB1P07942 1786 aa11.48□□□□□ -0.57
NIF3L1-204ENST00000409357 MAGEA13PA6NCF6 341 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 ANXA13P27216 316 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 USP11P51784 963 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 HAND2P61296 217 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 KPNB1Q14974 876 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 TAOK1Q7L7X3 1001 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 LRRC43Q8N309 656 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 TAF4BQ92750 862 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 TRIM47Q96LD4 638 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 NR1H4Q96RI1 486 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 CSRNP1Q96S65 589 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 ROPN1BQ9BZX4 212 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 MMADHCQ9H3L0 296 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 ROPN1Q9HAT0 212 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 IL1RAPL1Q9NZN1 696 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 EHD2Q9NZN4 543 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 DIS3Q9Y2L1 958 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
NIF3L1-204ENST00000409357 NCK2O43639 380 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 KLRC4O43908 158 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 FGFR1OPO95684 399 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 KRT2P35908 639 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 MCAMP43121 646 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 NFIAQ12857 509 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 RTN1Q16799 776 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 TMEM67Q5HYA8 995 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 MICU3Q86XE3 530 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 OR2W6PQ8NHA6 318 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 BAP1Q92560 729 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 P2RX5Q93086 422 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 ZNF333Q96JL9 665 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 NDNQ99608 321 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 UBAC1Q9BSL1 405 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 TLE6Q9H808 572 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 DCLRE1BQ9H816 532 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 SMARCAL1Q9NZC9 954 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 DENND2AQ9ULE3 1009 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
NIF3L1-204ENST00000409357 SIGLEC16A6NMB1 481 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 BTBD19C9JJ37 291 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 PGRMC1O00264 195 aaKnown RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 WNT7AO00755 349 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 GPAA1O43292 621 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 PALMO75781 387 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 SERPING1P05155 500 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 LDHBP07195 334 aaKnown RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 SKIP12755 728 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 DESP17661 470 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 CASP1P29466 404 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 STAT6P42226 847 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 NR5A1Q13285 461 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 LSAMPQ13449 338 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 UBE3CQ15386 1083 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 RPS6KA1Q15418 735 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 CNGA2Q16280 664 aa11.46□□□□□ -0.58
NIF3L1-204ENST00000409357 PDXDC1Q6P996 788 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms