RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CKBP12277 381 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 THPOP40225 353 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 PPP1R2P41236 205 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 CASP5P51878 434 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 CRYBB1P53674 252 aaPredicted RBP22.55■■□□□ 1.2
VSX1-203ENST00000409285 BFSP2Q13515 415 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 KIZQ2M2Z5 673 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 SASS6Q6UVJ0 657 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 SRGAP1Q7Z6B7 1085 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 ZBTB8OSQ8IWT0 167 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 FUCA2Q9BTY2 467 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 FGFBP2Q9BYJ0 223 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 CELF4Q9BZC1 486 aaKnown RBP22.55■■□□□ 1.2
VSX1-203ENST00000409285 CCDC113Q9H0I3 377 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 SLC39A2Q9NP94 309 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 TBX21Q9UL17 535 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 PCDHB13Q9Y5F0 798 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 TRPV2Q9Y5S1 764 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 A0A087WZ62 844 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 BIN1O00499 593 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 GCNT3O95395 438 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 NMT1P30419 496 aaKnown RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 NLRP12P59046 1061 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 GUF1Q8N442 669 aaKnown RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 NLRP7Q8WX94 980 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 FDXACB1Q9BRP7 624 aaPredicted RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 KIFC3Q9BVG8 833 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 TBC1D7Q9P0N9 293 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 GDAQ9Y2T3 454 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 SQORQ9Y6N5 450 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 DENND3A2RUS2 1198 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 TNRC18O15417 2968 aaPredicted RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 KIF20AO95235 890 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 CLTBP09497 229 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 EIF4BP23588 611 aaKnown RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 MBTD1Q05BQ5 628 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 TMEM62Q0P6H9 643 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 FAM187BQ17R55 369 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 TRAF7Q6Q0C0 670 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 MLKLQ8NB16 471 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 GLIS3Q8NEA6 775 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 ZNF507Q8TCN5 953 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 SCFD1Q8WVM8 642 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 GCOM2Q9BZD3 368 aaPredicted RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 INO80BQ9C086 356 aaPredicted RBP22.54■■□□□ 1.2
VSX1-203ENST00000409285 ATP11BQ9Y2G3 1177 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 CDY2AQ9Y6F7 541 aa22.54■■□□□ 1.2
VSX1-203ENST00000409285 CHRNA1P02708 482 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 CCDC192P0DO97 292 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 MYBP10242 640 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 DARSP14868 501 aaKnown RBP22.53■■□□□ 1.2
VSX1-203ENST00000409285 STX1AQ16623 288 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 CT47A1Q5JQC4 288 aaPredicted RBP22.53■■□□□ 1.2
VSX1-203ENST00000409285 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 MAP4K3Q8IVH8 894 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 MYOCDQ8IZQ8 938 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 PRIMPOLQ96LW4 560 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 OSMRQ99650 979 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 NOC4LQ9BVI4 516 aaKnown RBP22.53■■□□□ 1.2
VSX1-203ENST00000409285 FZD8Q9H461 694 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 ANO10Q9NW15 660 aa22.53■■□□□ 1.2
VSX1-203ENST00000409285 TET1Q8NFU7 2136 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 TYRO3Q06418 890 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 MAPK6Q16659 721 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 DPCR1Q3MIW9 517 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 L1TD1Q5T7N2 865 aaKnown RBP22.52■■□□□ 1.2
VSX1-203ENST00000409285 ZNF618Q5T7W0 954 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 TAS1R3Q7RTX0 852 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 SMYD4Q8IYR2 804 aaPredicted RBP22.52■■□□□ 1.2
VSX1-203ENST00000409285 ADSSL1Q8N142 457 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 SCLT1Q96NL6 688 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 ANP32EQ9BTT0 268 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 HTATIP2Q9BUP3 242 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 MINDY3Q9H8M7 445 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 TBX20Q9UMR3 447 aa22.52■■□□□ 1.2
VSX1-203ENST00000409285 K7ERI5 159 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 SELPP16109 830 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 PRCPP42785 496 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 ZNF445P59923 1031 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 STIM1Q13586 685 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 ZC2HC1CQ53FD0 456 aaPredicted RBP22.51■■□□□ 1.19
VSX1-203ENST00000409285 ISM2Q6H9L7 571 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 USP38Q8NB14 1042 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 TMEM40Q8WWA1 233 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 HIPK3Q9H422 1215 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 CDHR5Q9HBB8 845 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 PRMT7Q9NVM4 692 aaPredicted RBP22.51■■□□□ 1.19
VSX1-203ENST00000409285 DACH1Q9UI36 760 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 ZMYM2Q9UBW7 1377 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 MICAL3Q7RTP6 2002 aa22.51■■□□□ 1.19
VSX1-203ENST00000409285 PPP1R3GB7ZBB8 358 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 KIAA0355O15063 1070 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 PARNO95453 639 aaKnown RBP22.5■■□□□ 1.19
VSX1-203ENST00000409285 PIGRP01833 764 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 CTSHP09668 335 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 IQCF3P0C7M6 154 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 HOXD13P35453 343 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 STRN3Q13033 797 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 FOXR2Q6PJQ5 311 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 FAM43BQ6ZT52 329 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms