RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 CD1EP15812 388 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 MAN1A1P33908 653 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 QARSP47897 775 aaKnown RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 PSMC5P62195 406 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 PPFIA1Q13136 1202 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 TTC19Q6DKK2 380 aaPredicted RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 OR6B2Q6IFH4 312 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 C7orf31Q8N865 590 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 KCTD6Q8NC69 237 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 BBOF1Q8ND07 529 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 SPON1Q9HCB6 807 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 ABHD10Q9NUJ1 306 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 POLLQ9UGP5 575 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 PCDHGB4Q9UN71 923 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 PCDHGB5Q9Y5G0 923 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 PVALEFA0A1B0GWK0 134 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 DENND3A2RUS2 1198 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 IQCA1LA6NCM1 817 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 LRRC53A6NM62 1247 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 IPO5O00410 1097 aaKnown RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 BUB1BO60566 1050 aaPredicted RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 ANXA13P27216 316 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 YWHABP31946 246 aaKnown RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 CXCR5P32302 372 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 CLCN6P51797 869 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 KNOP1Q1ED39 458 aaKnown RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF568Q3ZCX4 644 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 FASTKD5Q7L8L6 764 aaKnown RBP4.08□□□□□ -1.76
RGPD4-201ENST00000408999 CTAGE3PQ8IX95 158 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 SIX6OS1Q8N1H7 587 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 MCPH1Q8NEM0 835 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 TMEM39BQ9GZU3 492 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 TUFT1Q9NNX1 390 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 GGA3Q9NZ52 723 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 NYAP2Q9P242 653 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 SLC9A2Q9UBY0 812 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 CDC23Q9UJX2 597 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 ANAPC4Q9UJX5 808 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 DNAJC12Q9UKB3 198 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF148Q9UQR1 794 aa4.08□□□□□ -1.76
RGPD4-201ENST00000408999 KDM4FA0A1W2PPD8 638 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 RASSF10A6NK89 507 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 NDUFAB1O14561 156 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 NDUFB10O96000 172 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PDHBP11177 359 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 GNAT1P11488 350 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 COPB2P35606 906 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF131P52739 623 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SLC12A2P55011 1212 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 GFPT1Q06210 699 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 CD300CQ08708 224 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SGO2Q562F6 1265 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 B4GALNT4Q76KP1 1039 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 CATSPER4Q7RTX7 472 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 MAP7D3Q8IWC1 876 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 THNSL1Q8IYQ7 743 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 VPS52Q8N1B4 723 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF280CQ8ND82 737 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 HSPH1Q92598 858 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PBKQ96KB5 322 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 WDR24Q96S15 920 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 NRXN3Q9Y4C0 1643 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 MED1Q15648 1581 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 BAZ2AQ9UIF9 1905 aaKnown RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 GPR75-ASB3A0A0A6YYF3 556 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PGRMC1O00264 195 aaKnown RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 HGSO14964 777 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ECEL1O95672 775 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 MYBL1P10243 752 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 GBP1P32455 592 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 GCLMP48507 274 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SF3A3Q12874 501 aaKnown RBP eCLIP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF699Q32M78 642 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 METTL16Q86W50 562 aaKnown RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SMC1BQ8NDV3 1235 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 UHMK1Q8TAS1 419 aaKnown RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZWILCHQ9H900 591 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 KIF9Q9HAQ2 790 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 MRPL47Q9HD33 250 aaKnown RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 JPH1Q9HDC5 661 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PCDHGA4Q9Y5G9 962 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 CLDN3O15551 220 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SH3BP5O60239 455 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 CTDNEP1O95476 244 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 VAMP7P51809 220 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 TKFCQ3LXA3 575 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PRAMEF18Q5VWM3 479 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 DSTYKQ6XUX3 929 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ADGRA1Q86SQ6 560 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 OR6B3Q8NGW1 331 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 SAAL1Q96ER3 474 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 FAM114A2Q9NRY5 505 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 PRKAG2Q9UGJ0 569 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 HPS5Q9UPZ3 1129 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF469Q96JG9 3925 aaPredicted RBP4.07□□□□□ -1.76
RGPD4-201ENST00000408999 ASB14A6NK59 587 aa4.07□□□□□ -1.76
RGPD4-201ENST00000408999 MCF2LO15068 1137 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms