RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PPP1R16BQ96T49 567 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 XPNPEP1Q9NQW7 623 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 PANK4Q9NVE7 773 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 KIAA1468Q9P260 1216 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 SLC4A7Q9Y6M7 1214 aa9.25□□□□□ -0.93
GPC3-203ENST00000406757 TREHO43280 583 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 KPNA6O60684 536 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 FAM13AO94988 1023 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 CYP2C9P11712 490 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 SARSP49591 514 aaKnown RBP9.24□□□□□ -0.93
GPC3-203ENST00000406757 SLC26A2P50443 739 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 CLCN3P51790 818 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 MAPK7Q13164 816 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 EMC2Q15006 297 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 ZNF484Q5JVG2 852 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 MARCH8Q5T0T0 291 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 EFCAB12Q6NXP0 572 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 MTHFD1LQ6UB35 978 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 RUFY4Q6ZNE9 571 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 DEFB128Q7Z7B8 93 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 SFR1Q86XK3 245 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 KSR1Q8IVT5 923 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
GPC3-203ENST00000406757 DAW1Q8N136 415 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 MYCT1Q8N699 235 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 C7orf31Q8N865 590 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 GLIS3Q8NEA6 775 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 FBXO22Q8NEZ5 403 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 LMBR1Q8WVP7 490 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 BSNDQ8WZ55 320 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 FGFBP2Q9BYJ0 223 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 LRRC27Q9C0I9 530 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 POLR3FQ9H1D9 316 aaPredicted RBP9.24□□□□□ -0.93
GPC3-203ENST00000406757 MAGEF1Q9HAY2 307 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 ATP6V0A4Q9HBG4 840 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 TRMT13Q9NUP7 481 aaKnown RBP9.24□□□□□ -0.93
GPC3-203ENST00000406757 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
GPC3-203ENST00000406757 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 GDAQ9Y2T3 454 aa9.24□□□□□ -0.93
GPC3-203ENST00000406757 C17orf102A2RUQ5 167 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 TBCAO75347 108 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 DGAT1O75907 488 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 SMC2O95347 1197 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 C22orf31O95567 290 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 ATP2A2P16615 1042 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 COL9A1P20849 921 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 BMP6P22004 513 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 NMT1P30419 496 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 MRPS5P82675 430 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 TMEM62Q0P6H9 643 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 COASYQ13057 564 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 HERC4Q5GLZ8 1057 aaPredicted RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 SASS6Q6UVJ0 657 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 RBM43Q6ZSC3 357 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 UNC13DQ70J99 1090 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.932e-7■■■□□ 17.5
GPC3-203ENST00000406757 CCDC34Q96HJ3 373 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 KATNAL1Q9BW62 490 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 SEZ6LQ9BYH1 1024 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 FAM49AQ9H0Q0 323 aaPredicted RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 DHX33Q9H6R0 707 aaKnown RBP9.23□□□□□ -0.93
GPC3-203ENST00000406757 RAPGEFL1Q9UHV5 662 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 TUBE1Q9UJT0 475 aa9.23□□□□□ -0.93
GPC3-203ENST00000406757 ARID2Q68CP9 1835 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 GBF1Q92538 1859 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 CCDC169A6NNP5 214 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 RFXAPO00287 272 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 VTNP04004 478 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 SRGAP2CP0DJJ0 459 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 MYBP10242 640 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 GUCY2CP25092 1073 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 ARL2P36404 184 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 RFC5P40937 340 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 PEX3P56589 373 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 NLRP12P59046 1061 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 TYRO3Q06418 890 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 STK4Q13043 487 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 MORC3Q14149 939 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 ZC2HC1CQ53FD0 456 aaPredicted RBP9.22□□□□□ -0.93
GPC3-203ENST00000406757 NFRKBQ6P4R8 1299 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 CCDC65Q8IXS2 484 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 SPATA20Q8TB22 786 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 PRPF31Q8WWY3 499 aaKnown RBP9.22□□□□□ -0.93
GPC3-203ENST00000406757 SLC7A3Q8WY07 619 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 WNT8BQ93098 351 aa9.22□□□□□ -0.93
GPC3-203ENST00000406757 UHRF1Q96T88 793 aaPredicted RBP9.22□□□□□ -0.93
GPC3-203ENST00000406757 IKZF4Q9H2S9 585 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms