RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TTC39CQ8N584 583 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 C2orf40Q9H1Z8 148 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ASAP2O43150 1006 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 NME3Q13232 169 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 ARHGAP26Q9UNA1 814 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 MAP3K7CLP57077 242 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 KHDRBS2Q5VWX1 349 aaKnown RBP12.81□□□□□ -0.36
SMCR8-201ENST00000406438 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 RHPN2Q8IUC4 686 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 BHMT2Q9H2M3 363 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 NDFIP2Q9NV92 336 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 STAP1Q9ULZ2 295 aa12.81□□□□□ -0.36
SMCR8-201ENST00000406438 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 PRELPP51888 382 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CASP8Q14790 479 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CIAPIN1Q6FI81 312 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SH3TC2Q8TF17 1288 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 MRPL4Q9BYD3 311 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SYTL2Q9HCH5 934 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 MIF4GDA9UHW6 222 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 IFNAR1P17181 557 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 MB21D1Q8N884 522 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 RAPGEF5Q92565 580 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SRPK1Q96SB4 655 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 DNAJC17Q9NVM6 304 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SFI1A8K8P3 1242 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 HSPA1BP0DMV9 641 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 ZNF394Q53GI3 561 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 ITPRIPL1Q6GPH6 555 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 RNF135Q8IUD6 432 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 BTBD6Q96KE9 485 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CEP72Q9P209 647 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 IP6K2Q9UHH9 426 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 A0A087WUV0 522 aaPredicted RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 GNA15P30679 374 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 GPS1Q13098 491 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 LRRC8BQ6P9F7 803 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TBC1D1Q86TI0 1168 aaPredicted RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CCDC90BQ9GZT6 254 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TAP1Q03518 808 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TFDP2Q14188 446 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 KYAT1Q16773 422 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 AARS2Q5JTZ9 985 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 RESP18Q5W5W9 173 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TRIM72Q6ZMU5 477 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CEP70Q8NHQ1 597 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
SMCR8-201ENST00000406438 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 CYP21A2P08686 494 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 ANKS3Q6ZW76 656 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 SENP1Q9P0U3 644 aa12.8□□□□□ -0.36
SMCR8-201ENST00000406438 ROR1Q01973 937 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 KRT31Q15323 416 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ANO4Q32M45 955 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 DCAF4L1Q3SXM0 396 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 XXYLT1Q8NBI6 393 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 MAP4P27816 1152 aaKnown RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 CDC25AP30304 524 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 THEMIS2Q5TEJ8 643 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 YAF2Q8IY57 180 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 TJP2Q9UDY2 1190 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 RGS9BPQ6ZS82 235 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 VPS11Q9H270 941 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ADAMTS1Q9UHI8 967 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 MYH15Q9Y2K3 1946 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 CYP27A1Q02318 531 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 TBC1D19Q8N5T2 526 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PCDHA6Q9UN73 950 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PCDHA8Q9Y5H6 950 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 LIFRP42702 1097 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PARD6BQ9BYG5 372 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms