RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 AHCYL2Q96HN2 611 aaKnown RBP6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 JAG2Q9Y219 1238 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 GOLGA6CA6NDK9 693 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 GOLGA6BA6NDN3 693 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 ARHGAP6O43182 974 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 FOXS1O43638 330 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 GOLGA6DP0CG33 693 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 MRE11P49959 708 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 PHC1P78364 1004 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 R3HDM1Q15032 1099 aaKnown RBP6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 GFOD2Q3B7J2 385 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZMAT1Q5H9K5 638 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 TMEM240Q5SV17 173 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 NME9Q86XW9 330 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 RTF1Q92541 710 aaKnown RBP6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 SLC5A5Q92911 643 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 GNRHR2Q96P88 292 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 RPS6KC1Q96S38 1066 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 OR10A2Q9H208 303 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 TOMM22Q9NS69 142 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 SMPD4Q9NXE4 827 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 GOLGA6AQ9NYA3 693 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 NOB1Q9ULX3 412 aaKnown RBP6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 CTDP1Q9Y5B0 961 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZNF536O15090 1300 aa6.43□□□□□ -1.38
HMGB1P13-201ENST00000406019 NPEPPSL1A6NEC2 478 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 ELL2O00472 640 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 EIF3JO75822 258 aaKnown RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 MYL1P05976 194 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 MYBL2P10244 700 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 RBP3P10745 1247 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 ADAM8P78325 824 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 ADCY1Q08828 1119 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 BIRC2Q13490 618 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 TCTN3Q6NUS6 607 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 GLB1LQ6UWU2 654 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 UNQ6494/PRO21346Q6UXR6 183 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 CIR1Q86X95 450 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 DGKHQ86XP1 1220 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 C1orf162Q8NEQ5 155 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 LMF1Q96S06 567 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZNF700Q9H0M5 742 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 MS4A5Q9H3V2 200 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 IP6K2Q9UHH9 426 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 OAZ3Q9UMX2 235 aa6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 LUC7L2Q9Y383 392 aaKnown RBP6.42□□□□□ -1.38
HMGB1P13-201ENST00000406019 TRIM75PA6NK02 468 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 ADRB1P08588 477 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZNF20P17024 532 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 PCBP2Q15366 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 TERF2Q15554 542 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 DDB1Q16531 1140 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZBTB41Q5SVQ8 909 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 BROXQ5VW32 411 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 USP30Q70CQ3 517 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 BMP8AQ7Z5Y6 402 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 CPA6Q8N4T0 437 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZNF496Q96IT1 587 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 MYL10Q9BUA6 226 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 POFUT1Q9H488 388 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 CHST12Q9NRB3 414 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 KCMF1Q9P0J7 381 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 ST6GALNAC2Q9UJ37 374 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 DENND2AQ9ULE3 1009 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 PNMA8BQ9ULN7 279 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 VWA7Q9Y334 891 aa6.41□□□□□ -1.38
HMGB1P13-201ENST00000406019 A0A0A6YYJ9 748 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 A0A0A6YYK5 440 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 LCHNA4D1U4 455 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 PMS2P1A4D2B8 440 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 C1QTNF3-AMACRE9PGA6 284 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 PLIN1O60240 522 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 PRPF6O94906 941 aaKnown RBP6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 MT-CO1P00395 513 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 U2AF1L5P0DN76 240 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 RECQLP46063 649 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 U2AF1Q01081 240 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 MAP3K12Q12852 859 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 PRAMEF9Q5VWM5 478 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 KIAA1841Q6NSI8 718 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 PHYKPLQ8IUZ5 450 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 TPH2Q8IWU9 490 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZZZ3Q8IYH5 903 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 Q8TCH9 128 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 FAXDC2Q96IV6 333 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 LRRC37BQ96QE4 947 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 TUBGCP5Q96RT8 1024 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 DPYSL5Q9BPU6 564 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 MSL2Q9HCI7 577 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 C14orf119Q9NWQ9 140 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 MAGEL2Q9UJ55 1249 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 ANKRD6Q9Y2G4 727 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 NR2E1Q9Y466 385 aa6.4□□□□□ -1.38
HMGB1P13-201ENST00000406019 SNUPNO95149 360 aaKnown RBP6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 CFBP00751 764 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms